Rhodopsin 3D structures
From Proteopedia
(Difference between revisions)
(New page: ==3D structures of rhodopsin== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Rhodopsin (Rn) **5te5, [[5te3...) |
|||
| Line 23: | Line 23: | ||
**[[3dqb]], [[4a4m]], [[4j4q]] - bRn + guanine nucleotide-binding protein peptide <br /> | **[[3dqb]], [[4a4m]], [[4j4q]] - bRn + guanine nucleotide-binding protein peptide <br /> | ||
**[[4bey]] - bRn (mutant) + guanine nucleotide-binding protein peptide <br /> | **[[4bey]] - bRn (mutant) + guanine nucleotide-binding protein peptide <br /> | ||
| + | **[[6nwe]] - bRn + peptide + detergents<br /> | ||
| + | **[[6pel]] - bRn + peptide + detergents + citronellol<br /> | ||
| + | **[[6pgs]] - bRn + peptide + detergents + geraniol<br /> | ||
| + | **[[6ph7]] - bRn + peptide + detergents + nerol<br /> | ||
**[[5en0]] - bRN (mutant) + guanine nucleotide-binding protein peptide + retinal<br /> | **[[5en0]] - bRN (mutant) + guanine nucleotide-binding protein peptide + retinal<br /> | ||
**[[4pxf]] – bRn + arrestin peptide<br /> | **[[4pxf]] – bRn + arrestin peptide<br /> | ||
| Line 38: | Line 42: | ||
**[[4tl3]] – AaRn-1 (mutant) <br /> | **[[4tl3]] – AaRn-1 (mutant) <br /> | ||
**[[6sqg]] - Rn + retinal + lipid – lake phycodnavirus<br /> | **[[6sqg]] - Rn + retinal + lipid – lake phycodnavirus<br /> | ||
| + | **[[6kfq]] - Rn + retinal + lipid – ''Rubrobacter xylanophilus''<br /> | ||
*Sensory rhodopsin II | *Sensory rhodopsin II | ||
| Line 50: | Line 55: | ||
**[[4xtl]], [[4xtn]], [[4xto]], [[3x3b]], [[3x3c]], [[5jrf]] – DeRn – ''Dokdonia eikastra''<br /> | **[[4xtl]], [[4xtn]], [[4xto]], [[3x3b]], [[3x3c]], [[5jrf]] – DeRn – ''Dokdonia eikastra''<br /> | ||
**[[5jrf]] – DeRn + detergent + I<br /> | **[[5jrf]] – DeRn + detergent + I<br /> | ||
| - | **[[6rew]], [[6rex]], [[6rez]], [[6rf0]], [[6rf1]], [[6rf4]], [[6rf5]], [[6rf6]], [[6rf7]] – DeRn + detergent + Na + retinal<br /> | + | **[[6rew]], [[6rex]], [[6rez]], [[6rf0]], [[6rf1]], [[6rf4]], [[6rf5]], [[6rf6]], [[6rf7]], [[6tk1]], [[6tk2]], [[6tk3]], [[6tk4]], [[6tk5]], [[6tk6]], [[6tk7]], [[6xyt]], [[6yby]], [[6ybz]], [[6yc0]], [[6yc1]], [[6yc2]], [[6yc3]], [[6yc4]] – DeRn + detergent + Na + retinal<br /> |
| - | **[[6rf3]], [[6rf9]], [[6rfa]], [[6rfb]], [[6rfc]] – DeRn (mutant) + detergent + Na + retinal<br /> | + | **[[6rf3]], [[6rf9]], [[6rfa]], [[6rfb]], [[6rfc]], [[6yt4]] – DeRn (mutant) + detergent + Na + retinal<br /> |
*Chloride pump rhodopsin | *Chloride pump rhodopsin | ||
| - | **[[5g28]], [[5g2a]], [[5b2n]], [[5fjg]], [[5g54]], [[5ztk]], [[5ztl]], [[6ab9]], [[6aba]] – NmRn + retinal – ''Nonlabens marinus''<br /> | + | **[[5g28]], [[5g2a]], [[5b2n]], [[5fjg]], [[5g54]], [[5ztk]], [[5ztl]], [[6ab9]], [[6aba]], [[6jy6]], [[6jy7]], [[6jy8]], [[6jy9]], [[6jya]], [[6jyb]], [[6jyc]], [[6jyd]], [[6jye]], [[6jyf]], [[7cri]], [[7crj]] – NmRn + retinal – ''Nonlabens marinus''<br /> |
**[[5g2c]], [[5g2d]] - NmRn (mutant) + retinal<br /> | **[[5g2c]], [[5g2d]] - NmRn (mutant) + retinal<br /> | ||
| + | **[[6wp8]], [[6xl3]] – Rn (mutant) + detergent + retinal – ''Mastigocladopsis repens''<br /> | ||
*Metarhodopsin II | *Metarhodopsin II | ||
| Line 97: | Line 103: | ||
**[[4fbz]] - Rn + bacterioruberin + retinal – ''Haloterrigena thermotolerans''<br /> | **[[4fbz]] - Rn + bacterioruberin + retinal – ''Haloterrigena thermotolerans''<br /> | ||
| + | |||
| + | *Cyanorhodopsin | ||
| + | |||
| + | **[[6lm0]] - CRn + detergents + retinal – ''Cyanobacteria calothrix''<br /> | ||
| + | **[[6lm1]] - CRn + detergents + retinal – ''Cyanobacteria tolypothrix''<br /> | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 09:33, 22 October 2020
3D structures of rhodopsin
Updated on 22-October-2020
