6p78

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Current revision (11:16, 30 October 2024) (edit) (undo)
 
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<StructureSection load='6p78' size='340' side='right'caption='[[6p78]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
<StructureSection load='6p78' size='340' side='right'caption='[[6p78]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6p78]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_spiroforme_atcc_29900 Clostridium spiroforme atcc 29900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P78 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6P78 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6p78]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_spiroforme_DSM_1552 Clostridium spiroforme DSM 1552]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P78 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6P78 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=QUG:2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one'>QUG</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.726&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SMC:S-METHYLCYSTEINE'>SMC</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=QUG:2-azanyl-5-[[[(1~{S},4~{S},5~{S})-4,5-bis(oxidanyl)cyclopent-2-en-1-yl]amino]methyl]-1,7-dihydropyrrolo[2,3-d]pyrimidin-4-one'>QUG</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=SMC:S-METHYLCYSTEINE'>SMC</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CLOSPI_01524 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=428126 Clostridium spiroforme ATCC 29900])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6p78 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p78 OCA], [https://pdbe.org/6p78 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6p78 RCSB], [https://www.ebi.ac.uk/pdbsum/6p78 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6p78 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6p78 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p78 OCA], [http://pdbe.org/6p78 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6p78 RCSB], [http://www.ebi.ac.uk/pdbsum/6p78 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6p78 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/B1C2R2_9FIRM B1C2R2_9FIRM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Clostridium spiroforme atcc 29900]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Almo, S C]]
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[[Category: Almo SC]]
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[[Category: Grove, T L]]
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[[Category: Grove TL]]
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[[Category: Iron 4 sulfur cluster binding]]
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[[Category: C-n lyase activity]]
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[[Category: Lyase]]
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[[Category: Metal ion binding]]
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[[Category: Radical sam enzyme]]
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Current revision

queuine lyase from Clostridium spiroforme bound to SAM and queuine

PDB ID 6p78

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