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| <StructureSection load='4pht' size='340' side='right'caption='[[4pht]], [[Resolution|resolution]] 2.83Å' scene=''> | | <StructureSection load='4pht' size='340' side='right'caption='[[4pht]], [[Resolution|resolution]] 2.83Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4pht]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibvu Vibvu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PHT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PHT FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4pht]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_vulnificus_CMCP6 Vibrio vulnificus CMCP6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PHT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PHT FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gspL, VV1_0869 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=216895 VIBVU]), gspE, VV1_0876 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=216895 VIBVU])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pht FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pht OCA], [https://pdbe.org/4pht PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pht RCSB], [https://www.ebi.ac.uk/pdbsum/4pht PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pht ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pht FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pht OCA], [http://pdbe.org/4pht PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pht RCSB], [http://www.ebi.ac.uk/pdbsum/4pht PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pht ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
- | == Function == | |
- | [[http://www.uniprot.org/uniprot/Q8DDT8_VIBVU Q8DDT8_VIBVU]] Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.[PIRNR:PIRNR015761] | |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Vibvu]] | + | [[Category: Vibrio vulnificus CMCP6]] |
- | [[Category: Hol, W]] | + | [[Category: Hol W]] |
- | [[Category: Korotkov, K]] | + | [[Category: Korotkov K]] |
- | [[Category: Lu, C]] | + | [[Category: Lu C]] |
- | [[Category: Protein transport]]
| + | |
| Structural highlights
Publication Abstract from PubMed
The type II secretion system (T2SS) is present in many Gram-negative bacteria and is responsible for secreting a large number of folded proteins, including major virulence factors, across the outer membrane. The T2SS consists of 11-15 different proteins most of which are present in multiple copies in the assembled secretion machinery. The ATPase GspE, essential for the functioning of the T2SS, contains three domains (N1E, N2E and CTE) of which the N1E domain is associated with the cytoplasmic domain of the inner membrane protein GspL. Here we describe and analyze the structure of the GspE*cyto-GspL complex from Vibrio vulnificus in the presence of an ATP analog, AMPPNP. There are three such approximately 83 kDa complexes per asymmetric unit with essentially the same structure. The N2E and CTE domains of a single V. vulnificus GspE subunit adopt a mutual orientation that has not been seen before in any of the previous GspE structures, neither in structures of related ATPases from other secretion systems. This underlines the tremendous conformational flexibility of the T2SS secretion ATPase. Cyto-GspL interacts not only with the N1E domain, but also with the CTE domain and is even in contact with AMPPNP. Moreover, the cyto-GspL domains engage in two types of mutual interactions, resulting in two essentially identical, but crystallographically independent, "cyto-GspL rods" that run throughout the crystal. Very similar rods are present in previous crystals of cyto-GspL and of the N1E*cyto-GspL complex. This arrangement, now seen four times in three entirely different crystal forms, involves contacts between highly conserved residues suggesting a role in the biogenesis or the secretion mechanism or both of the T2SS.
Crystal structure of the full-length ATPase GspE from the Vibrio vulnificus type II secretion system in complex with the cytoplasmic domain of GspL.,Lu C, Korotkov KV, Hol WG J Struct Biol. 2014 Sep;187(3):223-35. doi: 10.1016/j.jsb.2014.07.006. Epub 2014 , Aug 1. PMID:25092625[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Lu C, Korotkov KV, Hol WG. Crystal structure of the full-length ATPase GspE from the Vibrio vulnificus type II secretion system in complex with the cytoplasmic domain of GspL. J Struct Biol. 2014 Sep;187(3):223-35. doi: 10.1016/j.jsb.2014.07.006. Epub 2014 , Aug 1. PMID:25092625 doi:http://dx.doi.org/10.1016/j.jsb.2014.07.006
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