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5uib

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Current revision (13:27, 4 October 2023) (edit) (undo)
 
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<StructureSection load='5uib' size='340' side='right'caption='[[5uib]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
<StructureSection load='5uib' size='340' side='right'caption='[[5uib]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5uib]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrrk Agrrk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UIB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UIB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5uib]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_radiobacter_K84 Agrobacterium radiobacter K84]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UIB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UIB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.65&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5uhw|5uhw]], [[5uhz|5uhz]], [[5ui9|5ui9]], [[5uia|5uia]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Arad_9238 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=311403 AGRRK])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5uib FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uib OCA], [https://pdbe.org/5uib PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5uib RCSB], [https://www.ebi.ac.uk/pdbsum/5uib PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5uib ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5uib FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uib OCA], [http://pdbe.org/5uib PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5uib RCSB], [http://www.ebi.ac.uk/pdbsum/5uib PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5uib ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/APSD_AGRRK APSD_AGRRK] Involved in catabolism of D-apiose. Catalyzes oxidation of D-apiose to D-apionolactone.<ref>PMID:29867142</ref>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Agrrk]]
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[[Category: Agrobacterium radiobacter K84]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Almo, S C]]
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[[Category: Almo SC]]
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[[Category: Bonanno, J B]]
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[[Category: Bonanno JB]]
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[[Category: Cook, W J]]
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[[Category: Cook WJ]]
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[[Category: Fedorov, A A]]
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[[Category: Fedorov AA]]
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[[Category: Fedorov, E V]]
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[[Category: Fedorov EV]]
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[[Category: Gerlt, J A]]
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[[Category: Gerlt JA]]
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[[Category: Huang, H]]
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[[Category: Huang H]]
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[[Category: L-tartrate]]
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[[Category: Oxidoreductase]]
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Current revision

Crystal Structure of an Oxidoreductase from Agrobacterium radiobacter in Complex with NAD+, L-tartaric acid and Magnesium

PDB ID 5uib

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