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5vjp

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Current revision (13:50, 4 October 2023) (edit) (undo)
 
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<StructureSection load='5vjp' size='340' side='right'caption='[[5vjp]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
<StructureSection load='5vjp' size='340' side='right'caption='[[5vjp]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5vjp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VJP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VJP FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5vjp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VJP FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IR9:[(2S,3R,4S,5S)-3,4-dihydroxypyrrolidine-2,5-diyl]bis(methylene)+bis[dihydrogen+(phosphate)]'>IR9</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5vjn|5vjn]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IR9:[(2S,3R,4S,5S)-3,4-dihydroxypyrrolidine-2,5-diyl]bis(methylene)+bis[dihydrogen+(phosphate)]'>IR9</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">APT1, YML022W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vjp OCA], [https://pdbe.org/5vjp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vjp RCSB], [https://www.ebi.ac.uk/pdbsum/5vjp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vjp ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenine_phosphoribosyltransferase Adenine phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.7 2.4.2.7] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vjp OCA], [http://pdbe.org/5vjp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vjp RCSB], [http://www.ebi.ac.uk/pdbsum/5vjp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vjp ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/APT1_YEAST APT1_YEAST]] Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.<ref>PMID:9864350</ref>
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[https://www.uniprot.org/uniprot/APT1_YEAST APT1_YEAST] Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.<ref>PMID:9864350</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Adenine phosphoribosyltransferase]]
 
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[[Category: Atcc 18824]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Almo, S C]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Bonanno, J B]]
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[[Category: Almo SC]]
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[[Category: Ducati, R G]]
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[[Category: Bonanno JB]]
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[[Category: Harijan, R K]]
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[[Category: Ducati RG]]
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[[Category: Schramm, V L]]
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[[Category: Harijan RK]]
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[[Category: 5-dideoxy-2]]
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[[Category: Schramm VL]]
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[[Category: 5-imino-altritol-1]]
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[[Category: 6-bisphosphate]]
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[[Category: L-2]]
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[[Category: L-diab]]
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[[Category: Transferase-transferase inhibitor complex]]
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[[Category: Transition state analogue]]
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Current revision

Crystal Structure of Adenine Phosphoribosyltransferase from Saccharomyces cerevisiae Complexed with L-2,5-Dideoxy-2,5-Imino-Altritol 1,6-Bisphosphate (L-DIAB) and Adenine

PDB ID 5vjp

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