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| <StructureSection load='4pgb' size='340' side='right'caption='[[4pgb]], [[Resolution|resolution]] 2.80Å' scene=''> | | <StructureSection load='4pgb' size='340' side='right'caption='[[4pgb]], [[Resolution|resolution]] 2.80Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4pgb]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGB FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4pgb]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Murine_respirovirus Murine respirovirus] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PGB FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4pg9|4pg9]], [[4pgc|4pgc]], [[4pgd|4pgd]], [[4pge|4pge]]</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pgb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgb OCA], [https://pdbe.org/4pgb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pgb RCSB], [https://www.ebi.ac.uk/pdbsum/4pgb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgb ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">H2-K1, H2-K ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), B2m ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgb OCA], [http://pdbe.org/4pgb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pgb RCSB], [http://www.ebi.ac.uk/pdbsum/4pgb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgb ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/HA1B_MOUSE HA1B_MOUSE]] Involved in the presentation of foreign antigens to the immune system. [[http://www.uniprot.org/uniprot/B2MG_MOUSE B2MG_MOUSE]] Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | + | [https://www.uniprot.org/uniprot/HA1B_MOUSE HA1B_MOUSE] Involved in the presentation of foreign antigens to the immune system. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Lk3 transgenic mice]] | + | [[Category: Murine respirovirus]] |
- | [[Category: Celie, P H.N]] | + | [[Category: Mus musculus]] |
- | [[Category: Joosten, R P]] | + | [[Category: Celie PHN]] |
- | [[Category: Neefjes, J]] | + | [[Category: Joosten RP]] |
- | [[Category: Perrakis, A]] | + | [[Category: Neefjes J]] |
- | [[Category: Immune response]] | + | [[Category: Perrakis A]] |
- | [[Category: Immune system]]
| + | |
- | [[Category: Immune system-peptide complex]]
| + | |
- | [[Category: Immunoglobulin domain]]
| + | |
| Structural highlights
Function
HA1B_MOUSE Involved in the presentation of foreign antigens to the immune system.
Publication Abstract from PubMed
MHC class I molecules present a variable but limited repertoire of antigenic peptides for T-cell recognition. Understanding how peptide selection is achieved requires mechanistic insights into the interactions between the MHC I and candidate peptides. We find that, at first encounter, MHC I H-2K(b) considers a wide range of peptides, including those with expanded N termini and unfitting anchor residues. Discrimination occurs in the second step, when noncanonical peptides dissociate with faster exchange rates. This second step exhibits remarkable temperature sensitivity, as illustrated by numerous noncanonical peptides presented by H-2K(b) in cells cultured at 26 degrees C relative to 37 degrees C. Crystallographic analyses of H-2K(b)-peptide complexes suggest that a conformational adaptation of H-2K(b) drives the decisive step in peptide selection. We propose that MHC class I molecules consider initially a large peptide pool, subsequently refined by a temperature-sensitive induced-fit mechanism to retain the canonical peptide repertoire.
The first step of peptide selection in antigen presentation by MHC class I molecules.,Garstka MA, Fish A, Celie PH, Joosten RP, Janssen GM, Berlin I, Hoppes R, Stadnik M, Janssen L, Ovaa H, van Veelen PA, Perrakis A, Neefjes J Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1505-10. doi:, 10.1073/pnas.1416543112. Epub 2015 Jan 20. PMID:25605945[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Garstka MA, Fish A, Celie PH, Joosten RP, Janssen GM, Berlin I, Hoppes R, Stadnik M, Janssen L, Ovaa H, van Veelen PA, Perrakis A, Neefjes J. The first step of peptide selection in antigen presentation by MHC class I molecules. Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1505-10. doi:, 10.1073/pnas.1416543112. Epub 2015 Jan 20. PMID:25605945 doi:http://dx.doi.org/10.1073/pnas.1416543112
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