This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6nmy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:56, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6nmy' size='340' side='right'caption='[[6nmy]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
<StructureSection load='6nmy' size='340' side='right'caption='[[6nmy]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6nmy]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NMY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6NMY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6nmy]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NMY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6NMY FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.301&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6nmy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nmy OCA], [http://pdbe.org/6nmy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6nmy RCSB], [http://www.ebi.ac.uk/pdbsum/6nmy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6nmy ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6nmy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nmy OCA], [https://pdbe.org/6nmy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6nmy RCSB], [https://www.ebi.ac.uk/pdbsum/6nmy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6nmy ProSAT]</span></td></tr>
</table>
</table>
-
== Disease ==
 
-
[[http://www.uniprot.org/uniprot/IL3RB_HUMAN IL3RB_HUMAN]] Defects in CSF2RB are the cause of pulmonary surfactant metabolism dysfunction type 5 (SMDP5) [MIM:[http://omim.org/entry/614370 614370]]. SMDP5 is a rare lung disorder due to impaired surfactant homeostasis. It is characterized by alveolar filling with floccular material that stains positive using the periodic acid-Schiff method and is derived from surfactant phospholipids and protein components. Excessive lipoproteins accumulation in the alveoli results in severe respiratory distress.<ref>PMID:21075760</ref>
 
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/IL3RB_HUMAN IL3RB_HUMAN]] High affinity receptor for interleukin-3, interleukin-5 and granulocyte-macrophage colony-stimulating factor. [[http://www.uniprot.org/uniprot/IL3RA_HUMAN IL3RA_HUMAN]] This is a receptor for interleukin-3. [[http://www.uniprot.org/uniprot/IL3_HUMAN IL3_HUMAN]] Granulocyte/macrophage colony-stimulating factors are cytokines that act in hematopoiesis by controlling the production, differentiation, and function of 2 related white cell populations of the blood, the granulocytes and the monocytes-macrophages. This CSF induces granulocytes, macrophages, mast cells, stem cells, erythroid cells, eosinophils and megakaryocytes.
+
[https://www.uniprot.org/uniprot/IL3RA_HUMAN IL3RA_HUMAN] This is a receptor for interleukin-3.
-
== References ==
+
 
-
<references/>
+
==See Also==
 +
*[[Interleukin 3D structures|Interleukin 3D structures]]
 +
*[[Interleukin receptor 3D structures|Interleukin receptor 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Broughton, S E]]
+
[[Category: Broughton SE]]
-
[[Category: Dhagat, U]]
+
[[Category: Dhagat U]]
-
[[Category: Hercus, T R]]
+
[[Category: Hercus TR]]
-
[[Category: Kan, W L]]
+
[[Category: Kan WL]]
-
[[Category: Lopez, A F]]
+
[[Category: Lopez AF]]
-
[[Category: Nero, T L]]
+
[[Category: Nero TL]]
-
[[Category: Parker, M W]]
+
[[Category: Parker MW]]
-
[[Category: Cell surface]]
+
-
[[Category: Cytokine]]
+
-
[[Category: Cytokine-receptor complex]]
+
-
[[Category: Receptor assembly]]
+

Current revision

A Cytokine-receptor complex

PDB ID 6nmy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools