6q0s

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Current revision (07:39, 11 October 2023) (edit) (undo)
 
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<StructureSection load='6q0s' size='340' side='right'caption='[[6q0s]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
<StructureSection load='6q0s' size='340' side='right'caption='[[6q0s]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6q0s]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Q0S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6Q0S FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6q0s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_respiratory_syncytial_virus_(subgroup_B_/_strain_18537) Human respiratory syncytial virus (subgroup B / strain 18537)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Q0S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Q0S FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6q0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6q0s OCA], [http://pdbe.org/6q0s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6q0s RCSB], [http://www.ebi.ac.uk/pdbsum/6q0s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6q0s ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6q0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6q0s OCA], [https://pdbe.org/6q0s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6q0s RCSB], [https://www.ebi.ac.uk/pdbsum/6q0s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6q0s ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/FUS_HRSV1 FUS_HRSV1]] During virus entry, induces fusion of viral and cellular membranes leading to delivery of the nucleocapsid into the cytoplasm. The fusogenic activity is inactive untill entry into host cell endosome, where a furin-like protease cleaves off a small peptide between F1 and F2. Interacts directly with heparan sulfate and may participate in virus attachment. Furthermore, the F2 subunit was identified as the major determinant of RSV host cell specificity. Later in infection, proteins F expressed at the plasma membrane of infected cells can mediate fusion with adjacent cells to form syncytia, a cytopathic effect that could lead to tissue necrosis. The fusion protein is also able to trigger p53-dependent apoptosis.[UniProtKB:P03420]
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[https://www.uniprot.org/uniprot/FUS_HRSV1 FUS_HRSV1] During virus entry, induces fusion of viral and cellular membranes leading to delivery of the nucleocapsid into the cytoplasm. The fusogenic activity is inactive untill entry into host cell endosome, where a furin-like protease cleaves off a small peptide between F1 and F2. Interacts directly with heparan sulfate and may participate in virus attachment. Furthermore, the F2 subunit was identified as the major determinant of RSV host cell specificity. Later in infection, proteins F expressed at the plasma membrane of infected cells can mediate fusion with adjacent cells to form syncytia, a cytopathic effect that could lead to tissue necrosis. The fusion protein is also able to trigger p53-dependent apoptosis.[UniProtKB:P03420]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bao, A]]
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[[Category: Bao A]]
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[[Category: Joyce, M G]]
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[[Category: Joyce MG]]
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[[Category: Kwong, P D]]
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[[Category: Kwong PD]]
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[[Category: Immune system]]
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[[Category: Respiratory syncytial virus]]
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[[Category: Structure-based vaccine design]]
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Current revision

Crystal Structure of RSV strain B18537 Prefusion-stabilized glycoprotein F Variant DS-Cav1

PDB ID 6q0s

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