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| <StructureSection load='4hsr' size='340' side='right'caption='[[4hsr]], [[Resolution|resolution]] 2.13Å' scene=''> | | <StructureSection load='4hsr' size='340' side='right'caption='[[4hsr]], [[Resolution|resolution]] 2.13Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4hsr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"chlorobacterium"_guillebeau_1890,_nom._rejic._opin._6_(not_"chlorobacterium"_lauterborn_1916) "chlorobacterium" guillebeau 1890, nom. rejic. opin. 6 (not "chlorobacterium" lauterborn 1916)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HSR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HSR FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4hsr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas Pseudomonas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HSR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HSR FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GLJ:5,5-DIHYDROXY-L-NORVALINE'>GLJ</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLJ:5,5-DIHYDROXY-L-NORVALINE'>GLJ</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4hst|4hst]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hsr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hsr OCA], [https://pdbe.org/4hsr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hsr RCSB], [https://www.ebi.ac.uk/pdbsum/4hsr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hsr ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hsr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hsr OCA], [http://pdbe.org/4hsr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4hsr RCSB], [http://www.ebi.ac.uk/pdbsum/4hsr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4hsr ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Anandan, A]] | + | [[Category: Pseudomonas]] |
- | [[Category: Flematti, G]] | + | [[Category: Anandan A]] |
- | [[Category: Golden, E]] | + | [[Category: Flematti G]] |
- | [[Category: Molla, G]] | + | [[Category: Golden E]] |
- | [[Category: Patterson, R]] | + | [[Category: Molla G]] |
- | [[Category: Pollegioni, L]] | + | [[Category: Patterson R]] |
- | [[Category: Rosini, E]] | + | [[Category: Pollegioni L]] |
- | [[Category: Tie, W J]] | + | [[Category: Rosini E]] |
- | [[Category: Vrielink, A]] | + | [[Category: Tie WJ]] |
- | [[Category: Hydrolase]]
| + | [[Category: Vrielink A]] |
- | [[Category: N-terminal hydrolase]]
| + | |
- | [[Category: Protein engineering]]
| + | |
- | [[Category: Substrate specificity]]
| + | |
- | [[Category: Transition state analogue]]
| + | |
| Structural highlights
Publication Abstract from PubMed
The crystal structure of wild-type form of glutaryl-7-ACA acylase from Pseudomonas N176 and a double mutant of the protein (His57betaSer/His70betaSer) that displays enhanced catalytic efficiency on cephalosporin C over glutaryl-7-aminocephalosporanic acid has been determined. The structures show a heterodimer made up of an alpha chain (229 residues) and a beta chain (543 residues) with a deep cavity, which constitutes the active site. Comparison of the wild-type and mutant structures provide insights into the molecular reasons for the observed enhanced specificity on cephalosporin C over glutaryl-7-aminocephalosporanic acid and offered the basis to evolve a further improve enzyme variant. The nucleophilic catalytic serine residue, Ser1beta, is situated at the base of the active site cavity. The electron density reveals a ligand covalently bound to the catalytic serine residue such that a tetrahedral adduct is formed. This is proposed to mimic the transition state of the enzyme for both the maturation step and the catalysis of the substrates. A view of the transitions state configuration of the enzyme provides important insights into the mechanism of substrate binding and catalysis.
Structure of a class III engineered cephalosporin acylase. Comparisons to class I acylase and implications for differences in substrate specificity and catalytic activity.,Golden E, Paterson R, Tie WJ, Anandan A, Flematti G, Molla G, Rosini E, Pollegioni L, Vrielink A Biochem J. 2013 Feb 4. PMID:23373797[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Golden E, Paterson R, Tie WJ, Anandan A, Flematti G, Molla G, Rosini E, Pollegioni L, Vrielink A. Structure of a class III engineered cephalosporin acylase. Comparisons to class I acylase and implications for differences in substrate specificity and catalytic activity. Biochem J. 2013 Feb 4. PMID:23373797 doi:http://dx.doi.org/10.1042/BJ20121715
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