6jex

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:07, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6jex' size='340' side='right'caption='[[6jex]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
<StructureSection load='6jex' size='340' side='right'caption='[[6jex]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6jex]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JEX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6JEX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6jex]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii_MRSN_3527 Acinetobacter baumannii MRSN 3527]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JEX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6JEX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LHY:L-[(N-HYDROXYAMINO)CARBONYL]PHENYLALANINE'>LHY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LHY:L-[(N-HYDROXYAMINO)CARBONYL]PHENYLALANINE'>LHY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6jex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jex OCA], [http://pdbe.org/6jex PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6jex RCSB], [http://www.ebi.ac.uk/pdbsum/6jex PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6jex ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6jex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jex OCA], [https://pdbe.org/6jex PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6jex RCSB], [https://www.ebi.ac.uk/pdbsum/6jex PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6jex ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/A0A0J1A8B1_ACIBA A0A0J1A8B1_ACIBA]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163]
+
[https://www.uniprot.org/uniprot/DEF_ACIBS DEF_ACIBS] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Acinetobacter baumannii MRSN 3527]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Peptide deformylase]]
+
[[Category: Ho TH]]
-
[[Category: Ho, T H]]
+
[[Category: Kang LW]]
-
[[Category: Kang, L W]]
+
[[Category: Lee IH]]
-
[[Category: Lee, I H]]
+
-
[[Category: Hydrolase]]
+

Current revision

K4U bound crystal peptide deformylase from Acinetobacter baumanii

PDB ID 6jex

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools