6m8t

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Current revision (06:26, 11 October 2023) (edit) (undo)
 
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<StructureSection load='6m8t' size='340' side='right'caption='[[6m8t]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
<StructureSection load='6m8t' size='340' side='right'caption='[[6m8t]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6m8t]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6M8T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6M8T FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6m8t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6M8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6M8T FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.67&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6m8u|6m8u]], [[6m8v|6m8v]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Flavin_prenyltransferase Flavin prenyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.129 2.5.1.129] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6m8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6m8t OCA], [https://pdbe.org/6m8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6m8t RCSB], [https://www.ebi.ac.uk/pdbsum/6m8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6m8t ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6m8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6m8t OCA], [http://pdbe.org/6m8t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6m8t RCSB], [http://www.ebi.ac.uk/pdbsum/6m8t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6m8t ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/UBIX_ARCFU UBIX_ARCFU]] Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.
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[https://www.uniprot.org/uniprot/UBIX_ARCFU UBIX_ARCFU] Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Flavin prenyltransferase]]
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[[Category: Archaeoglobus fulgidus DSM 4304]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Khusnutidnova, A]]
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[[Category: Khusnutidnova A]]
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[[Category: Savchenko, A]]
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[[Category: Savchenko A]]
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[[Category: Skarina, T]]
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[[Category: Skarina T]]
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[[Category: Stogios, P J]]
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[[Category: Stogios PJ]]
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[[Category: Wawrzak, Z]]
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[[Category: Wawrzak Z]]
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[[Category: Yakunin, A F]]
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[[Category: Yakunin AF]]
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[[Category: Fmn binding]]
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[[Category: Lyase]]
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[[Category: Prenyl transferase]]
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[[Category: Ubix]]
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Current revision

Crystal structure of UbiX-like FMN prenyltransferase AF1214 from Archaeoglobus fulgidus, FMN complex

PDB ID 6m8t

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