This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6p7c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:24, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6p7c' size='340' side='right'caption='[[6p7c]], [[Resolution|resolution]] 2.76&Aring;' scene=''>
<StructureSection load='6p7c' size='340' side='right'caption='[[6p7c]], [[Resolution|resolution]] 2.76&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6p7c]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P7C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6P7C FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6p7c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P7C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6P7C FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.76&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1pjs|1pjs]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6p7c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p7c OCA], [http://pdbe.org/6p7c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6p7c RCSB], [http://www.ebi.ac.uk/pdbsum/6p7c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6p7c ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6p7c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p7c OCA], [https://pdbe.org/6p7c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6p7c RCSB], [https://www.ebi.ac.uk/pdbsum/6p7c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6p7c ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/A0A0F7JCI1_SALER A0A0F7JCI1_SALER]] Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.[HAMAP-Rule:MF_01646][SAAS:SAAS00971394]
+
[https://www.uniprot.org/uniprot/CYSG_SALTY CYSG_SALTY] Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.<ref>PMID:14595395</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 6p7c" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6p7c" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Siroheme synthase|Siroheme synthase]]
== References ==
== References ==
<references/>
<references/>
Line 24: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pennington, J M]]
+
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-
[[Category: Stroupe, M E]]
+
[[Category: Pennington JM]]
-
[[Category: Cysg]]
+
[[Category: Stroupe ME]]
-
[[Category: Precorrin-2]]
+
-
[[Category: Siroheme]]
+
-
[[Category: Sirohydrochlorin]]
+
-
[[Category: Tetrapyrrole biosynthesis]]
+
-
[[Category: Transferase]]
+

Current revision

D104A/S128A S. typhimurium siroheme synthase

PDB ID 6p7c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools