5gv0

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Current revision (11:43, 2 August 2023) (edit) (undo)
 
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<StructureSection load='5gv0' size='340' side='right'caption='[[5gv0]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='5gv0' size='340' side='right'caption='[[5gv0]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5gv0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GV0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GV0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5gv0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GV0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GV0 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5gv3|5gv3]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Lamp1, Lamp-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gv0 OCA], [https://pdbe.org/5gv0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gv0 RCSB], [https://www.ebi.ac.uk/pdbsum/5gv0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gv0 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gv0 OCA], [http://pdbe.org/5gv0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gv0 RCSB], [http://www.ebi.ac.uk/pdbsum/5gv0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gv0 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/LAMP1_MOUSE LAMP1_MOUSE]] Presents carbohydrate ligands to selectins. Also implicated in tumor cell metastasis.
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[https://www.uniprot.org/uniprot/LAMP1_MOUSE LAMP1_MOUSE] Presents carbohydrate ligands to selectins. Also implicated in tumor cell metastasis.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Ehara, H]]
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[[Category: Ehara H]]
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[[Category: Kukimoto-Niino, M]]
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[[Category: Kukimoto-Niino M]]
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[[Category: Shirouzu, M]]
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[[Category: Shirouzu M]]
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[[Category: Tomabechi, Y]]
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[[Category: Tomabechi Y]]
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[[Category: Membrane protein]]
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Current revision

Crystal structure of the membrane-proximal domain of mouse lysosome-associated membrane protein 1 (LAMP-1)

PDB ID 5gv0

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