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| <StructureSection load='4qo5' size='340' side='right'caption='[[4qo5]], [[Resolution|resolution]] 1.70Å' scene=''> | | <StructureSection load='4qo5' size='340' side='right'caption='[[4qo5]], [[Resolution|resolution]] 1.70Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4qo5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ignicoccus_hospitalis_kin4/i Ignicoccus hospitalis kin4/i]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QO5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QO5 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4qo5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ignicoccus_hospitalis_KIN4/I Ignicoccus hospitalis KIN4/I]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QO5 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qo5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qo5 OCA], [http://pdbe.org/4qo5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qo5 RCSB], [http://www.ebi.ac.uk/pdbsum/4qo5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qo5 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qo5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qo5 OCA], [https://pdbe.org/4qo5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qo5 RCSB], [https://www.ebi.ac.uk/pdbsum/4qo5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qo5 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A8AB33_IGNH4 A8AB33_IGNH4] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Ignicoccus hospitalis kin4/i]] | + | [[Category: Ignicoccus hospitalis KIN4/I]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Rajendran, C]] | + | [[Category: Rajendran C]] |
- | [[Category: Heme binding protein]]
| + | |
- | [[Category: Membrane anchor]]
| + | |
- | [[Category: Multi-heme protein]]
| + | |
| Structural highlights
Function
A8AB33_IGNH4
Publication Abstract from PubMed
The Crenarchaeon Ignicoccus hospitalis lives in symbiosis with Nanoarchaeum equitans providing essential cell components and nutrients to its symbiont. Ignicoccus hospitalis shows an intriguing morphology that points towards an evolutionary role in driving compartmentalization. Therefore, the bioenergetics of this archaeal host-symbiont system remains a pressing question. To date, the only electron acceptor described for I. hospitalis is elemental sulfur, but the organism comprises genes that encode for enzymes involved in nitrogen metabolism, e.g., one nitrate reductase and two octaheme cytochrome c, Igni_0955 (IhOCC) and Igni_1359. Herein we detail functional and structural studies of the highly abundant IhOCC, including an X-ray crystal structure at 1.7 A resolution, the first three-dimensional structure of an archaeal OCC. The trimeric IhOCC is membrane-associated and exhibits significant structural and functional differences to previously characterized homologues within the hydroxylamine oxidoreductases (HAOs) and octaheme cytochrome c nitrite reductases (ONRs). The positions and spatial arrangement of the eight hemes are highly conserved, but the axial ligands of the individual hemes 3, 6 and 7 and the protein environment of the active site show significant differences. Most notably, the active site heme 4 lacks porphyrin-tyrosine cross-links present in the HAO family. We show that IhOCC efficiently reduces nitrite and hydroxylamine, with possible relevance to detoxification or energy conservation. This article is protected by copyright. All rights reserved.
In meso crystal structure of a novel membrane-associated octaheme cytochrome c from the Crenarchaeon Ignicoccus hospitalis.,Parey K, Fielding AJ, Sorgel M, Rachel R, Huber H, Ziegler C, Rajendran C FEBS J. 2016 Sep 1. doi: 10.1111/febs.13870. PMID:27586496[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Parey K, Fielding AJ, Sorgel M, Rachel R, Huber H, Ziegler C, Rajendran C. In meso crystal structure of a novel membrane-associated octaheme cytochrome c from the Crenarchaeon Ignicoccus hospitalis. FEBS J. 2016 Sep 1. doi: 10.1111/febs.13870. PMID:27586496 doi:http://dx.doi.org/10.1111/febs.13870
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