This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6r9v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:17, 24 January 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6r9v' size='340' side='right'caption='[[6r9v]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='6r9v' size='340' side='right'caption='[[6r9v]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6r9v]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pediococcus_acidilactici_dsm_20284 Pediococcus acidilactici dsm 20284]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R9V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6R9V FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6r9v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pediococcus_acidilactici_DSM_20284 Pediococcus acidilactici DSM 20284]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R9V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6R9V FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lctO, HMPREF0623_0568 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=862514 Pediococcus acidilactici DSM 20284])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6r9v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r9v OCA], [http://pdbe.org/6r9v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6r9v RCSB], [http://www.ebi.ac.uk/pdbsum/6r9v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6r9v ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6r9v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r9v OCA], [https://pdbe.org/6r9v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6r9v RCSB], [https://www.ebi.ac.uk/pdbsum/6r9v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6r9v ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/E0NE46_PEDAC E0NE46_PEDAC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pediococcus acidilactici dsm 20284]]
+
[[Category: Pediococcus acidilactici DSM 20284]]
-
[[Category: Ashok, Y]]
+
[[Category: Ashok Y]]
-
[[Category: Lehtio, L]]
+
[[Category: Lehtio L]]
-
[[Category: Maksimainen, M M]]
+
[[Category: Maksimainen MM]]
-
[[Category: Alpha hydroxyacid]]
+
-
[[Category: Fmn]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Tim barrel]]
+

Current revision

Crystal structure of Pediococcus acidilactici lactate oxidase A94G mutant

PDB ID 6r9v

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6r9v"
Personal tools