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Virus coat protein

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Line 101: Line 101:
**[[1f15]] – VCP – cucumber mosaic virus<br />
**[[1f15]] – VCP – cucumber mosaic virus<br />
**[[6mrl]] – VCP – cucumber leaf spot virus - Cryo EM<br />
**[[6mrl]] – VCP – cucumber leaf spot virus - Cryo EM<br />
-
**[[1auy]], [[1w39]] – VCP – turnip yellow mosaic virus<br />
+
**[[1auy]], [[1w39]] – tumvVCP – turnip yellow mosaic virus<br />
 +
**[[6t34]] – tumvVCP – Cryo EM<BR />
**[[3zxa]] - tcvVCP – turnip crinkle virus<br />
**[[3zxa]] - tcvVCP – turnip crinkle virus<br />
**[[3zx8]], [[3zx9]] – tcvVCP – Cryo EM<BR />
**[[3zx8]], [[3zx9]] – tcvVCP – Cryo EM<BR />
**[[5a79]] – VCP – barley stripe mosaic virus – cryo EM<br />
**[[5a79]] – VCP – barley stripe mosaic virus – cryo EM<br />
 +
**[[6scl]] – VCP – barley yellow dwarf virus – Cryo EM<br />
**[[5a2t]] – VCP – bamboo mosaic virus – cryo EM<br />
**[[5a2t]] – VCP – bamboo mosaic virus – cryo EM<br />
**[[1f2n]] - VCP – rice yellow mosaic virus<br />
**[[1f2n]] - VCP – rice yellow mosaic virus<br />
Line 125: Line 127:
**[[1za7]] - VCP (mutant) – cowpea chlorotic mottle virus<br />
**[[1za7]] - VCP (mutant) – cowpea chlorotic mottle virus<br />
**[[1pgl]], [[1pgw]], [[1bmv]] – VCP + RNA – bean pod mottle virus<br />
**[[1pgl]], [[1pgw]], [[1bmv]] – VCP + RNA – bean pod mottle virus<br />
 +
**[[6qcc]] – VCP – broad bean stain virus – Cryo EM<br />
**[[2tbv]] – VCP – tomato bushy stunt virus<br />
**[[2tbv]] – VCP – tomato bushy stunt virus<br />
**[[1laj]] – VCP + RNA – tomato aspermy virus<br />
**[[1laj]] – VCP + RNA – tomato aspermy virus<br />
Line 135: Line 138:
**[[1m1c]] – VCP – yeast L-A virus<br />
**[[1m1c]] – VCP – yeast L-A virus<br />
**[[3iym]] – VCP – Penicillium stoloniferum virus – Cryo EM<BR />
**[[3iym]] – VCP – Penicillium stoloniferum virus – Cryo EM<BR />
-
**[[6hxx]] – VCP – potato virus – Cryo EM<BR />
+
**[[6hxx]] – pvVCP – potato virus – Cryo EM<BR />
 +
**[[6sco]] – pvVCP + RNA – Cryo EM<br />
 +
**[[6hxx]] – VCP – potato leaf roll virus – Cryo EM<BR />
 +
**[[5fn1]] – VCP – pepino mosaic virus – Cryo EM<br />
*Virus coat protein by fiber diffraction
*Virus coat protein by fiber diffraction
Line 142: Line 148:
**[[1rmv]] - VCP + RNA – fibgrass mosaic virus<br />
**[[1rmv]] - VCP + RNA – fibgrass mosaic virus<br />
**[[1pfi]], [[2ifm]] – VCP – Pf1 virus<br />
**[[1pfi]], [[2ifm]] – VCP – Pf1 virus<br />
-
**[[1vtm]] - VCP - satellite tobacco mosaic virus<br />
+
**[[1vtm]] - stmvVCP <br />
*Virus coat protein of other viruses
*Virus coat protein of other viruses
 +
**[[1qrj]] – htlvVCP – Human T-cell lymphotrophic virus – NMR<BR />
 +
**[[1g03]] - htlvVCP N terminal - NMR<BR />
 +
**[[1dzl]] – hpvVCP L1 (mutant) – Human papillomavirus<br />
 +
**[[2r5h]], [[2r5i]], [[2r5j]], [[2r5k]] - hpvVCP L1<br />
 +
**[[1pov]] – VCP – poliovirus<br />
 +
**[[1no7]] – VCP Vp5 – Human herpes simplex virus<br />
**[[2mev]], [[1mec]] – VCP – mengo virus<br />
**[[2mev]], [[1mec]] – VCP – mengo virus<br />
**[[1bvp]] – VCP – bluetongue virus VP7<br />
**[[1bvp]] – VCP – bluetongue virus VP7<br />
Line 153: Line 165:
**[[1bbt]], [[1fod]], [[1fmd]], [[1qgc]] – fmdvVCP – foot and mouth disease virus<br />
**[[1bbt]], [[1fod]], [[1fmd]], [[1qgc]] – fmdvVCP – foot and mouth disease virus<br />
**[[2wv4]], [[2wv5]] – fmdvVCP Vp1 + picornain<br />
**[[2wv4]], [[2wv5]] – fmdvVCP Vp1 + picornain<br />
-
**[[1fpv]], [[1c8e]], [[1c8f]], [[1c8g]] – VCP – feline panleukopenia virus<br />
 
**[[1c8d]], [[1c8h]] - VCP – canine panleukopenia virus<br />
**[[1c8d]], [[1c8h]] - VCP – canine panleukopenia virus<br />
**[[2bbv]] – VCP + RNA – black beetle virus<br />
**[[2bbv]] – VCP + RNA – black beetle virus<br />
-
**[[1pov]] – VCP – poliovirus<br />
 
**[[1sva]] – svVCP – simian virus 40<br />
**[[1sva]] – svVCP – simian virus 40<br />
-
**[[3bwq]], [[3bwr]] – svVCP Vp1
+
**[[3bwq]], [[3bwr]] – svVCP Vp1<br />
 +
**[[2kgf]] – mpmvVCP N-terminal – Mason-Pfizer monkey virus<br />
 +
**[[4ard]] – mpmvVCP P27 – Cryo EM<BR />
**[[1sid]], [[1sie]], [[1vpn]], [[1vps]], [[1cn3]] – VCP – murine polyomavirus<br />
**[[1sid]], [[1sie]], [[1vpn]], [[1vps]], [[1cn3]] – VCP – murine polyomavirus<br />
**[[3s7v]] - pvVCP Vp1 – polyomavirus<br />
**[[3s7v]] - pvVCP Vp1 – polyomavirus<br />
Line 165: Line 177:
**[[1dyl]] – sfvVCP – Cryo EM<br />
**[[1dyl]] – sfvVCP – Cryo EM<br />
**[[2yew]] - VCP + envelope glycoprotein – Barmah forest virus - Cryo EM<BR />
**[[2yew]] - VCP + envelope glycoprotein – Barmah forest virus - Cryo EM<BR />
 +
**[[1dnv]] – VCP – Galleria mellonella densovirus<br />
**[[2eia]], [[1eia]] – VCP – equine infectious anemia virus<br />
**[[2eia]], [[1eia]] – VCP – equine infectious anemia virus<br />
-
**[[1dnv]] – VCP – Galleria mellonella densovirus<br />
 
**[[1ep5]], [[1ep6]] – eevVCP C terminal – equine encephalitis virus<br />
**[[1ep5]], [[1ep6]] – eevVCP C terminal – equine encephalitis virus<br />
**[[3j0c]], [[3j0g]] - eevVCP C terminal + envelope glycoprotein – Cryo EM<BR />
**[[3j0c]], [[3j0g]] - eevVCP C terminal + envelope glycoprotein – Cryo EM<BR />
-
**[[3ve6]] – eevVCP NLS + importin<br />
+
**[[3ve6]] – eevVCP NLS + importin<br />>
-
**[[1qrj]] – HtlvVCP – HumanT-cell lymphotrophic virus – NMR<BR />
+
-
**[[1g03]] - HtlvVCP N terminal - NMR<BR />
+
-
**[[1dzl]] – hpvVCP L1 (mutant) – Human papillomavirus<br />
+
-
**[[2r5h]], [[2r5i]], [[2r5j]], [[2r5k]] - hpvVCP L1<br />
+
**[[3iyj]] - VCP L1 – bovine papillomavirus – Cryo EM<BR />
**[[3iyj]] - VCP L1 – bovine papillomavirus – Cryo EM<BR />
**[[1f8v]] – VCP + RNA – pariacoto virus<br />
**[[1f8v]] – VCP + RNA – pariacoto virus<br />
Line 189: Line 197:
**[[5tiq]], [[5tip]] – PbcvVCP – Parmecium bursaria chlorella virus<br />
**[[5tiq]], [[5tip]] – PbcvVCP – Parmecium bursaria chlorella virus<br />
**[[1m4x]] – PbcvVCP – Cryo EM<BR />
**[[1m4x]] – PbcvVCP – Cryo EM<BR />
-
**[[1no7]] – VCP Vp5 – Human herpes simplex virus<br />
 
**[[1ohf]] – VCP – Nudaurelia capensis omega virus<br />
**[[1ohf]] – VCP – Nudaurelia capensis omega virus<br />
-
**[[1mqt]] – VCP – swine vesicular disease virus<br />
 
**[[2p5p]] – VCP domain III – West Nile virus<br />
**[[2p5p]] – VCP domain III – West Nile virus<br />
**[[3cnf]] – VCP Vp1+Vp3 – polyhedrosis virus – Cryo EM<BR />
**[[3cnf]] – VCP Vp1+Vp3 – polyhedrosis virus – Cryo EM<BR />
Line 197: Line 203:
**[[3fbm]] – VCP Vp2 – avian infectious bursal disease virus<br />
**[[3fbm]] – VCP Vp2 – avian infectious bursal disease virus<br />
**[[2qqp]] – VCP + RNA – Providence virus<br />
**[[2qqp]] – VCP + RNA – Providence virus<br />
-
**[[2kgf]] – mpmvVCP N-terminal – Mason-Pfizer monkey virus<br />
 
-
**[[4ard]] – mpmvVCP P27 – Cryo EM<BR />
 
**[[3ide]] – VCP Vp2 – infectious pancreatic necrosis virus<br />
**[[3ide]] – VCP Vp2 – infectious pancreatic necrosis virus<br />
**[[4rft]], [[4rfu]], [[4wiz]] - VCP – grouper nervous necrosis virus<br />
**[[4rft]], [[4rfu]], [[4wiz]] - VCP – grouper nervous necrosis virus<br />
Line 208: Line 212:
**[[2xgy]] – relvVCP N terminal + cyclophilin<br />
**[[2xgy]] – relvVCP N terminal + cyclophilin<br />
**[[3r0r]] – VCP – pig circovirus<br />
**[[3r0r]] – VCP – pig circovirus<br />
 +
**[[1mqt]] – VCP – swine vesicular disease virus<br />
**[[3izx]] – bmcvVCP Vp3 + structural protein 5 – Bombyx mori cypovirus – Cryo EM<BR />
**[[3izx]] – bmcvVCP Vp3 + structural protein 5 – Bombyx mori cypovirus – Cryo EM<BR />
**[[3j17]] - bmcvVCP Vp3 Vp5<br />
**[[3j17]] - bmcvVCP Vp3 Vp5<br />
**[[3vbf]], [[3vbh]], [[3vbo]], [[3vbr]], [[3vbs]], [[3vbu]] – VCP – human enterovirus<br />
**[[3vbf]], [[3vbh]], [[3vbo]], [[3vbr]], [[3vbs]], [[3vbu]] – VCP – human enterovirus<br />
**[[3s6p]] – VCP – Helicoverpa armigera stunt virus<br />
**[[3s6p]] – VCP – Helicoverpa armigera stunt virus<br />
-
**[[3m8l]] – VCP – feline calcivirus<br />
+
**[[3m8l]] – FcVCP – feline calcivirus<br />
-
**[[5fn1]] – VCP – pepino mosaic virus – Cryo EM<br />
+
**[[6gsi]] – FcVCP + Vp2 + junctional adhesion molecule– Cryo EM<br />
 +
**[[1fpv]], [[1c8e]], [[1c8f]], [[1c8g]] – VCP – feline panleukopenia virus<br />
 +
**[[6ojn]] – VCP - singapore grouper iridovirus - Cryo EM<br />
 +
**[[6rj0]] – VCP – Atlantic cod nervous necrosis virus – Cryo EM<br />
**[[5tc1]] – Epms2VCP + maturation protein + phage MS2 genome – Enterobacteria phage MS2<br />
**[[5tc1]] – Epms2VCP + maturation protein + phage MS2 genome – Enterobacteria phage MS2<br />
**[[4zor]] – Epms2VCP <br />
**[[4zor]] – Epms2VCP <br />

Revision as of 11:41, 26 March 2020

Structure of HIV-I coat protein hexamer (PDB entry 3gv2)

Drag the structure with the mouse to rotate

3D structures of virus coat proteins

Updated on 26-March-2020

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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