This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6sbi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:38, 24 January 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6sbi' size='340' side='right'caption='[[6sbi]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='6sbi' size='340' side='right'caption='[[6sbi]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6sbi]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SBI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6SBI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6sbi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SBI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SBI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6sbi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sbi OCA], [http://pdbe.org/6sbi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6sbi RCSB], [http://www.ebi.ac.uk/pdbsum/6sbi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6sbi ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6sbi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sbi OCA], [https://pdbe.org/6sbi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sbi RCSB], [https://www.ebi.ac.uk/pdbsum/6sbi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sbi ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/FAHD1_MOUSE FAHD1_MOUSE]] Probable mitochondrial acylpyruvase which is able to hydrolyze acetylpyruvate and fumarylpyruvate in vitro (By similarity). Also has oxaloacetate decarboxylase activity (PubMed:25575590).[UniProtKB:Q6P587]<ref>PMID:25575590</ref>
+
[https://www.uniprot.org/uniprot/FAHD1_MOUSE FAHD1_MOUSE] Probable mitochondrial acylpyruvase which is able to hydrolyze acetylpyruvate and fumarylpyruvate in vitro (By similarity). Also has oxaloacetate decarboxylase activity (PubMed:25575590).[UniProtKB:Q6P587]<ref>PMID:25575590</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Naschberger, A]]
+
[[Category: Mus musculus]]
-
[[Category: Rupp, B]]
+
[[Category: Naschberger A]]
-
[[Category: Weiss, A K.H]]
+
[[Category: Rupp B]]
-
[[Category: Hydrolase]]
+
[[Category: Weiss AKH]]
-
[[Category: Mitochondria]]
+
-
[[Category: Oxalate binding]]
+
-
[[Category: Tca cycle]]
+

Current revision

X-ray structure of murine Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) in complex with inhibitor oxalate

PDB ID 6sbi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools