This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5dle

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (21:48, 28 June 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5dle' size='340' side='right'caption='[[5dle]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
<StructureSection load='5dle' size='340' side='right'caption='[[5dle]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5dle]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Borbu Borbu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DLE OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5DLE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5dle]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Borreliella_burgdorferi_B31 Borreliella burgdorferi B31]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DLE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DLE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BB_0408 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224326 BORBU])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5dle FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dle OCA], [http://pdbe.org/5dle PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dle RCSB], [http://www.ebi.ac.uk/pdbsum/5dle PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dle ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dle FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dle OCA], [https://pdbe.org/5dle PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dle RCSB], [https://www.ebi.ac.uk/pdbsum/5dle PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dle ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O51369_BORBU O51369_BORBU]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Borbu]]
+
[[Category: Borreliella burgdorferi B31]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
 
-
[[Category: Borellia burgdorferi]]
 
-
[[Category: Fructose-specific iiabc component]]
 
-
[[Category: Pts system]]
 
-
[[Category: Ssgcid]]
 
-
[[Category: Transferase]]
 

Current revision

Crystal structure from a domain (Thr161-F265) from fructose-specific iiabc component (Pts system) from Borrelia burgdorferi

PDB ID 5dle

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools