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5mcy

From Proteopedia

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The structure of the mature HIV-1 CA pentamer in intact virus particles

5mcy, resolution 8.80Å

Structural highlights

5mcy is a 20 chain structure with sequence from Human immunodeficiency virus 1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	Electron Microscopy, Resolution 8.8Å
Experimental data:	Check to display Experimental Data
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

B6DRA0_9HIV1

Publication Abstract from PubMed

HIV-1 contains a cone-shaped capsid encasing the viral genome. This capsid is thought to follow fullerene geometry-a curved hexameric lattice of the capsid protein, CA, closed by incorporating 12 CA pentamers. Current models for core structure are based on crystallography of hexameric and cross-linked pentameric CA, electron microscopy of tubular CA arrays, and simulations. Here, we report subnanometer-resolution cryo-electron tomography structures of hexameric and pentameric CA within intact HIV-1 particles. Whereas the hexamer structure is compatible with crystallography studies, the pentamer forms using different interfaces. Determining multiple structures revealed how CA flexes to form the variably curved core shell. We show that HIV-1 CA assembles both aberrant and perfect fullerene cones, supporting models in which conical cores assemble de novo after maturation.

The structure and flexibility of conical HIV-1 capsids determined within intact virions.,Mattei S, Glass B, Hagen WJ, Krausslich HG, Briggs JA Science. 2016 Dec 16;354(6318):1434-1437. PMID:27980210^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Mattei S, Glass B, Hagen WJ, Krausslich HG, Briggs JA. The structure and flexibility of conical HIV-1 capsids determined within intact virions. Science. 2016 Dec 16;354(6318):1434-1437. PMID:27980210 doi:http://dx.doi.org/10.1126/science.aah4972

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 See Also
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5mcy"

@@ Line 3: / Line 3: @@
 <SX load='5mcy' size='340' side='right' viewer='molstar' caption='[[5mcy]], [[Resolution|resolution]] 8.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5MCY FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MCY FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5mcy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mcy OCA], [http://pdbe.org/5mcy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mcy RCSB], [http://www.ebi.ac.uk/pdbsum/5mcy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mcy ProSAT]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 8.8&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mcy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mcy OCA], [https://pdbe.org/5mcy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mcy RCSB], [https://www.ebi.ac.uk/pdbsum/5mcy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mcy ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/B6DRA0_9HIV1 B6DRA0_9HIV1]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 18: / Line 21: @@
 ==See Also==
 *[[Gag polyprotein 3D structures|Gag polyprotein 3D structures]]
+*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 == References ==
 <references/>
@@ Line 24: / Line 28: @@
 [[Category: Human immunodeficiency virus 1]]
 [[Category: Large Structures]]
-[[Category: Briggs, J A.G]]
+[[Category: Briggs JAG]]
-[[Category: Glass, B]]
+[[Category: Glass B]]
-[[Category: Hagen, W J.H]]
+[[Category: Hagen WJH]]
-[[Category: Kraeusslich, H G]]
+[[Category: Kraeusslich H-G]]
-[[Category: Mattei, S]]
+[[Category: Mattei S]]
-[[Category: Capsid]]
-[[Category: Hiv-1]]
-[[Category: Pentamer]]
-[[Category: Retrovirus]]
-[[Category: Viral protein]]

5mcy

From Proteopedia

Current revision

The structure of the mature HIV-1 CA pentamer in intact virus particles

Structural highlights

Function

Publication Abstract from PubMed

See Also

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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