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SARS-CoV-2 protein NSP6
From Proteopedia
(Difference between revisions)
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| - | < | + | <StructureSection load='' size='340' side='right' caption='Caption for this structure' scene='84/842075/Orf10/1'> |
| - | {{Theoretical_model}} | + | {{Theoretical_model}} {{Template:ModelConfidence}} |
| + | To the right is an '''[[AlphaFold]]2''' 3D model of SARS CoV-2 Protein NSP6 color coded by the pLDDT scores. It corresponds to the highest ranked model in terms of the pLDDT confidence scores, ''i.e.'', model 3<ref name="MIT_ColabFold"> MIT ColabFold https://colab.research.google.com/github/sokrypton/ColabFold/blob/main/beta/AlphaFold2_advanced.ipynb </ref>. | ||
| + | == Function == | ||
| + | '''Open Reading Frame 10 (ORF10)''' | ||
== Function == | == Function == | ||
'''Non-structural protein 6 (nsp6)''' | '''Non-structural protein 6 (nsp6)''' | ||
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== Structural highlights == | == Structural highlights == | ||
| + | [[Image:SARS-CoV-2_Protein_NSP6.gif|250px|left|thumb|'''Morph''' of the top 5 ranked [[AlphaFold]]2 models of '''SARS-CoV-2 Protein NSP6''', ''rainbow'' color coded N-C<ref name="MIT_ColabFold"/>.]] | ||
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== See also == | == See also == | ||
[[Coronavirus_Disease 2019 (COVID-19)]] | [[Coronavirus_Disease 2019 (COVID-19)]] | ||
__NOTOC__ | __NOTOC__ | ||
| - | </ | + | </StructureSection> |
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 11:12, 6 February 2022
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References
- ↑ 1.0 1.1 MIT ColabFold https://colab.research.google.com/github/sokrypton/ColabFold/blob/main/beta/AlphaFold2_advanced.ipynb
- ↑ Modeling of the SARS-COV-2 Genome
- ↑ Zhang C, Zheng W, Huang X, Bell EW, Zhou X, Zhang Y. Protein Structure and Sequence Reanalysis of 2019-nCoV Genome Refutes Snakes as Its Intermediate Host and the Unique Similarity between Its Spike Protein Insertions and HIV-1. J Proteome Res. 2020 Apr 3;19(4):1351-1360. doi: 10.1021/acs.jproteome.0c00129., Epub 2020 Mar 24. PMID:32200634 doi:http://dx.doi.org/10.1021/acs.jproteome.0c00129
