5e5i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:13, 5 July 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5e5i' size='340' side='right'caption='[[5e5i]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='5e5i' size='340' side='right'caption='[[5e5i]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5e5i]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Toxgo Toxgo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E5I OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5E5I FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5e5i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E5I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5E5I FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5JV:4-[(E)-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)AMINO]PENT-4-ENOIC+ACID'>5JV</scene>, <scene name='pdbligand=5NJ:6-[2-METHYL-3-OXIDANYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]-4-OXIDANYLIDENE-HEXANOIC+ACID'>5NJ</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4nog|4nog]], [[5e3k|5e3k]], [[4zwm|4zwm]], [[4zlv|4zlv]], [[5dj9|5dj9]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5JV:4-[(E)-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)AMINO]PENT-4-ENOIC+ACID'>5JV</scene>, <scene name='pdbligand=5NJ:6-[2-METHYL-3-OXIDANYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]-4-OXIDANYLIDENE-HEXANOIC+ACID'>5NJ</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TGME49_269110 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5811 TOXGO])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5e5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e5i OCA], [https://pdbe.org/5e5i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5e5i RCSB], [https://www.ebi.ac.uk/pdbsum/5e5i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5e5i ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ornithine_aminotransferase Ornithine aminotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.13 2.6.1.13] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5e5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e5i OCA], [http://pdbe.org/5e5i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5e5i RCSB], [http://www.ebi.ac.uk/pdbsum/5e5i PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5e5i ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/S8EY38_TOXGM S8EY38_TOXGM]
==See Also==
==See Also==
Line 16: Line 16:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Ornithine aminotransferase]]
+
[[Category: Toxoplasma gondii]]
-
[[Category: Toxgo]]
+
[[Category: Anderson WF]]
-
[[Category: Anderson, W F]]
+
[[Category: Filippova EV]]
-
[[Category: Structural genomic]]
+
[[Category: Flores K]]
-
[[Category: Filippova, E V]]
+
[[Category: Le HV]]
-
[[Category: Flores, K]]
+
[[Category: McLeod RL]]
-
[[Category: Le, H V]]
+
[[Category: Minasov G]]
-
[[Category: McLeod, R L]]
+
[[Category: Silverman RB]]
-
[[Category: Minasov, G]]
+
-
[[Category: Silverman, R B]]
+
-
[[Category: Complex]]
+
-
[[Category: Csgid]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Parasite]]
+
-
[[Category: Pyridoxal 5'-phosphate]]
+
-
[[Category: Transferase]]
+

Current revision

Structure of the ornithine aminotransferase from Toxoplasma gondii in complex with inactivator

PDB ID 5e5i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools