6uih
From Proteopedia
(Difference between revisions)
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==Crystal structure of the core domain from the GST-like protein GDAP1== | ==Crystal structure of the core domain from the GST-like protein GDAP1== | ||
- | <StructureSection load='6uih' size='340' side='right'caption='[[6uih]]' scene=''> | + | <StructureSection load='6uih' size='340' side='right'caption='[[6uih]], [[Resolution|resolution]] 2.83Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UIH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6UIH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6uih]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UIH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6UIH FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6uih FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6uih OCA], [http://pdbe.org/6uih PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6uih RCSB], [http://www.ebi.ac.uk/pdbsum/6uih PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6uih ProSAT]</span></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Gdap1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6uih FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6uih OCA], [http://pdbe.org/6uih PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6uih RCSB], [http://www.ebi.ac.uk/pdbsum/6uih PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6uih ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/GDAP1_MOUSE GDAP1_MOUSE]] Regulates the mitochondrial network by promoting mitochondrial fission.<ref>PMID:16172208</ref> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Mutations in ganglioside-induced differentiation-associated protein 1 (GDAP1) alter mitochondrial morphology and result in several subtypes of the inherited peripheral neuropathy Charcot-Marie-Tooth disease; however, the mechanism by which GDAP1 functions has remained elusive. GDAP1 contains primary sequence homology to the GST superfamily; however, the question of whether GDAP1 is an active GST has not been clearly resolved. Here, we present biochemical evidence, suggesting that GDAP1 has lost the ability to bind glutathione without a loss of substrate binding activity. We have revealed that the alpha-loop, located within the H-site motif is the primary determinant for substrate binding. Using structural data of GDAP1, we have found that critical residues and configurations in the G-site which canonically interact with glutathione are altered in GDAP1, rendering it incapable of binding glutathione. Last, we have found that the overexpression of GDAP1 in HeLa cells results in a mitochondrial phenotype which is distinct from oxidative stress-induced mitochondrial fragmentation. This phenotype is dependent on the presence of the transmembrane domain, as well as a unique hydrophobic domain that is not found in canonical GSTs. Together, we data point toward a non-enzymatic role for GDAP1, such as a sensor or receptor. | ||
+ | |||
+ | Structural and functional divergence of GDAP1 from the glutathione S-transferase superfamily.,Googins MR, Woghiren-Afegbua AO, Calderon M, St Croix CM, Kiselyov KI, VanDemark AP FASEB J. 2020 Apr 10. doi: 10.1096/fj.202000110R. PMID:32274853<ref>PMID:32274853</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6uih" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Googins | + | [[Category: Lk3 transgenic mice]] |
- | [[Category: VanDemark | + | [[Category: Googins, M R]] |
+ | [[Category: VanDemark, A P]] | ||
+ | [[Category: Gdap1]] | ||
+ | [[Category: Gst-like]] | ||
+ | [[Category: Mitochondrial morphology]] | ||
+ | [[Category: Signaling protein]] | ||
+ | [[Category: Thioredoxin]] |
Revision as of 05:58, 13 May 2020
Crystal structure of the core domain from the GST-like protein GDAP1
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