6sqp
From Proteopedia
(Difference between revisions)
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==Crystal structure of Cat MDM2-S429E RING domain homodimer== | ==Crystal structure of Cat MDM2-S429E RING domain homodimer== | ||
- | <StructureSection load='6sqp' size='340' side='right'caption='[[6sqp]]' scene=''> | + | <StructureSection load='6sqp' size='340' side='right'caption='[[6sqp]], [[Resolution|resolution]] 1.21Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SQP OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6SQP FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6sqp]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Cat Cat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SQP OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6SQP FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6sqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sqp OCA], [http://pdbe.org/6sqp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6sqp RCSB], [http://www.ebi.ac.uk/pdbsum/6sqp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6sqp ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MDM2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9685 Cat])</td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/RING-type_E3_ubiquitin_transferase RING-type E3 ubiquitin transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.27 2.3.2.27] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6sqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sqp OCA], [http://pdbe.org/6sqp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6sqp RCSB], [http://www.ebi.ac.uk/pdbsum/6sqp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6sqp ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/MDM2_FELCA MDM2_FELCA]] E3 ubiquitin-protein ligase that mediates ubiquitination of p53/TP53, leading to its degradation by the proteasome. Inhibits p53/TP53- and p73/TP73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Also acts as a ubiquitin ligase E3 toward itself and ARRB1. Permits the nuclear export of p53/TP53. Promotes proteasome-dependent ubiquitin-independent degradation of retinoblastoma RB1 protein. Inhibits DAXX-mediated apoptosis by inducing its ubiquitination and degradation. Component of the TRIM28/KAP1-MDM2-p53/TP53 complex involved in stabilizing p53/TP53. Also component of the TRIM28/KAP1-ERBB4-MDM2 complex which links growth factor and DNA damage response pathways. Mediates ubiquitination and subsequent proteasome degradation of DYRK2 in nucleus. Ubiquitinates IGF1R and SNAI1 and promotes them to proteasomal degradation. Ubiquitinates DCX, leading to DCX degradation and reduction of the dendritic spine density of olfactory bulb granule cells. Ubiquitinates DLG4, leading to proteasomal degradation of DLG4 which is required for AMPA receptor endocytosis.[UniProtKB:P23804][UniProtKB:Q00987] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Phosphorylation of MDM2 by ATM upon DNA damage is an important mechanism for deregulating MDM2, thereby leading to p53 activation. ATM phosphorylates multiple residues near the RING domain of MDM2, but the underlying molecular basis for deregulation remains elusive. Here we show that Ser429 phosphorylation selectively enhances the ubiquitin ligase activity of MDM2 homodimer but not MDM2-MDMX heterodimer. A crystal structure of phospho-Ser429 (pS429)-MDM2 bound to E2-ubiquitin reveals a unique 310-helical feature present in MDM2 homodimer that allows pS429 to stabilize the closed E2-ubiquitin conformation and thereby enhancing ubiquitin transfer. In cells Ser429 phosphorylation increases MDM2 autoubiquitination and degradation upon DNA damage, whereas S429A substitution protects MDM2 from auto-degradation. Our results demonstrate that Ser429 phosphorylation serves as a switch to boost the activity of MDM2 homodimer and promote its self-destruction to enable rapid p53 stabilization and resolve a long-standing controversy surrounding MDM2 auto-degradation in response to DNA damage. | ||
+ | |||
+ | Structural basis for DNA damage-induced phosphoregulation of MDM2 RING domain.,Magnussen HM, Ahmed SF, Sibbet GJ, Hristova VA, Nomura K, Hock AK, Archibald LJ, Jamieson AG, Fushman D, Vousden KH, Weissman AM, Huang DT Nat Commun. 2020 Apr 29;11(1):2094. doi: 10.1038/s41467-020-15783-y. PMID:32350255<ref>PMID:32350255</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6sqp" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Cat]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Ahmed | + | [[Category: RING-type E3 ubiquitin transferase]] |
- | [[Category: Huang | + | [[Category: Ahmed, S F]] |
- | [[Category: Magnussen | + | [[Category: Huang, D T]] |
+ | [[Category: Magnussen, H M]] | ||
+ | [[Category: E3]] | ||
+ | [[Category: Ligase]] | ||
+ | [[Category: Mdm2]] | ||
+ | [[Category: Mdmx]] | ||
+ | [[Category: Phosphorylation]] | ||
+ | [[Category: Ubiquitin ligase]] |
Revision as of 05:53, 13 May 2020
Crystal structure of Cat MDM2-S429E RING domain homodimer
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