This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3cjw
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='3cjw' size='340' side='right'caption='[[3cjw]], [[Resolution|resolution]] 1.48Å' scene=''> | <StructureSection load='3cjw' size='340' side='right'caption='[[3cjw]], [[Resolution|resolution]] 1.48Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3cjw]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3cjw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJW FirstGlance]. <br> |
| - | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NR2F2, ARP1, TFCOUP2 ([ | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NR2F2, ARP1, TFCOUP2 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjw OCA], [https://pdbe.org/3cjw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjw RCSB], [https://www.ebi.ac.uk/pdbsum/3cjw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjw ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/COT2_HUMAN COT2_HUMAN]] Ligand-activated transcription factor. Activated by high concentrations of 9-cis-retinoic acid and all-trans-retinoic acid, but not by dexamethasone, cortisol or progesterone (in vitro). Regulation of the apolipoprotein A-I gene transcription. Binds to DNA site A.<ref>PMID:1899293</ref> <ref>PMID:9343308</ref> <ref>PMID:18798693</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Revision as of 07:55, 9 February 2022
Crystal structure of the human COUP-TFII ligand binding domain
| |||||||||||
Categories: Human | Large Structures | Kruse, S W | Reynolds, R | Vonrhein, C | Xu, H E | Coup-tfii | Dna-binding | Ligand binding domain | Metal-binding | Nuclear receptor | Nucleus | Orphan receptor | Receptor | Three-layered helical sandwich | Transcription | Transcription regulation | Zinc | Zinc-finger

