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| | <StructureSection load='6ul2' size='340' side='right'caption='[[6ul2]], [[Resolution|resolution]] 1.98Å' scene=''> | | <StructureSection load='6ul2' size='340' side='right'caption='[[6ul2]], [[Resolution|resolution]] 1.98Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[6ul2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Uncultivated_bacterium Uncultivated bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UL2 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6UL2 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6ul2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6UL2 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRP:TRYPTOPHAN'>TRP</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.979Å</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">borH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=77133 uncultivated bacterium])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRP:TRYPTOPHAN'>TRP</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ul2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ul2 OCA], [http://pdbe.org/6ul2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ul2 RCSB], [http://www.ebi.ac.uk/pdbsum/6ul2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ul2 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ul2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ul2 OCA], [https://pdbe.org/6ul2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ul2 RCSB], [https://www.ebi.ac.uk/pdbsum/6ul2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ul2 ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/M9QSI0_9BACT M9QSI0_9BACT] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Uncultivated bacterium]] | + | [[Category: Uncultured bacterium]] |
| - | [[Category: Bellizzi, J J]] | + | [[Category: Bellizzi JJ]] |
| - | [[Category: Lingkon, K]] | + | [[Category: Lingkon K]] |
| - | [[Category: Flavoprotein]]
| + | |
| - | [[Category: Halogenase oxidoreductase]]
| + | |
| Structural highlights
Function
M9QSI0_9BACT
Publication Abstract from PubMed
Flavin-dependent halogenases carry out regioselective aryl halide synthesis in aqueous solution at ambient temperature and neutral pH using benign halide salts, making them attractive catalysts for green chemistry. BorH and BorF, two proteins encoded by the biosynthetic gene cluster for the chlorinated bisindole alkaloid borregomycin A, are the halogenase and flavin reductase subunits of a tryptophan-6-halogenase. Quantitative conversion of l-tryptophan (Trp) to 6-chlorotryptophan could be achieved using 1.2 mol % BorH and 2 mol % BorF. The optimal reaction temperature for Trp chlorination is 45 degrees C, and the melting temperatures of BorH and BorF are 48 and 50 degrees C respectively, which are higher than the thermal parameters for most other halogenases previously studied. Steady-state kinetic analysis of Trp chlorination by BorH determined parameters of kcat =4.42 min(-1) , and KM of 9.78 mum at 45 degrees C. BorH exhibits a broad substrate scope, chlorinating and brominating a variety of aromatic substrates with and without indole groups. Chlorination of Trp at a 100 mg scale with 52 % crude yield, using 0.2 mol % BorH indicates that industrial scale biotransformations using BorH/BorF are feasible. The X-ray crystal structure of BorH with bound Trp provides additional evidence for the model that regioselectivity is determined by substrate positioning in the active site, showing C6 of Trp juxtaposed with the catalytic Lys79 in the same binding pose previously observed in the structure of Thal.
Structure and Activity of the Thermophilic Tryptophan-6 Halogenase BorH.,Lingkon K, Bellizzi JJ 3rd Chembiochem. 2019 Nov 6. doi: 10.1002/cbic.201900667. PMID:31692209[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Lingkon K, Bellizzi JJ 3rd. Structure and Activity of the Thermophilic Tryptophan-6 Halogenase BorH. Chembiochem. 2019 Nov 6. doi: 10.1002/cbic.201900667. PMID:31692209 doi:http://dx.doi.org/10.1002/cbic.201900667
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