This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5gmx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:36, 2 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5gmx' size='340' side='right'caption='[[5gmx]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5gmx' size='340' side='right'caption='[[5gmx]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5gmx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Uncultivated_bacterium Uncultivated bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GMX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5GMX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5gmx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GMX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GMX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Carboxylesterase Carboxylesterase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.1 3.1.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gmx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gmx OCA], [https://pdbe.org/5gmx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gmx RCSB], [https://www.ebi.ac.uk/pdbsum/5gmx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gmx ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5gmx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gmx OCA], [http://pdbe.org/5gmx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gmx RCSB], [http://www.ebi.ac.uk/pdbsum/5gmx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gmx ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0G2RKR9_9BACT A0A0G2RKR9_9BACT]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Carboxylesterase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Uncultivated bacterium]]
+
[[Category: Uncultured bacterium]]
-
[[Category: An, Y J]]
+
[[Category: An YJ]]
-
[[Category: Cha, S S]]
+
[[Category: Cha SS]]
-
[[Category: Estsrt1]]
+
-
[[Category: Extended spectrum beta-lactamase activity]]
+
-
[[Category: Flexibility]]
+
-
[[Category: Hydrolase]]
+

Current revision

Crystal structure of a family VIII carboxylesterase

PDB ID 5gmx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools