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5h6o

From Proteopedia

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Current revision (07:25, 9 August 2023) (edit) (undo)
 
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<StructureSection load='5h6o' size='340' side='right'caption='[[5h6o]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='5h6o' size='340' side='right'caption='[[5h6o]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5h6o]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6O OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5H6O FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5h6o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5H6O FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DPM:3-[5-{[3-(2-CARBOXYETHYL)-4-(CARBOXYMETHYL)-5-METHYL-1H-PYRROL-2-YL]METHYL}-4-(CARBOXYMETHYL)-1H-PYRROL-3-YL]PROPANOIC+ACID'>DPM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.702&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroxymethylbilane_synthase Hydroxymethylbilane synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.61 2.5.1.61] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DPM:3-[5-{[3-(2-CARBOXYETHYL)-4-(CARBOXYMETHYL)-5-METHYL-1H-PYRROL-2-YL]METHYL}-4-(CARBOXYMETHYL)-1H-PYRROL-3-YL]PROPANOIC+ACID'>DPM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5h6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6o OCA], [http://pdbe.org/5h6o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5h6o RCSB], [http://www.ebi.ac.uk/pdbsum/5h6o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6o ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5h6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6o OCA], [https://pdbe.org/5h6o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5h6o RCSB], [https://www.ebi.ac.uk/pdbsum/5h6o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6o ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/A0A0H6VB38_VIBCL A0A0H6VB38_VIBCL]] Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.[HAMAP-Rule:MF_00260][SAAS:SAAS00347445]
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[https://www.uniprot.org/uniprot/HEM3_VIBCH HEM3_VIBCH] Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Hydroxymethylbilane synthase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Chen, M]]
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[[Category: Vibrio cholerae]]
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[[Category: Funamizu, T]]
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[[Category: Chen M]]
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[[Category: Ishimori, K]]
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[[Category: Funamizu T]]
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[[Category: Tanaka, Y]]
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[[Category: Ishimori K]]
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[[Category: Uchida, T]]
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[[Category: Tanaka Y]]
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[[Category: Deaminase]]
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[[Category: Uchida T]]
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[[Category: Heme synthesis protein]]
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[[Category: Porphobilinogen]]
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[[Category: Transferase]]
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Current revision

Porphobilinogen deaminase from Vibrio Cholerae

PDB ID 5h6o

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