5hf4

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Current revision (07:33, 9 August 2023) (edit) (undo)
 
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<StructureSection load='5hf4' size='340' side='right'caption='[[5hf4]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='5hf4' size='340' side='right'caption='[[5hf4]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5hf4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HF4 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5HF4 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5hf4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HF4 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bfe|1bfe]], [[5hdy|5hdy]], [[5heb|5heb]], [[5hed|5hed]], [[5het|5het]], [[5hey|5hey]], [[5hf1|5hf1]], [[5hfb|5hfb]], [[5hfc|5hfc]], [[5fhd|5fhd]], [[5hfe|5hfe]], [[5hff|5hff]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Dlg4, Dlgh4, Psd95 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hf4 OCA], [https://pdbe.org/5hf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hf4 RCSB], [https://www.ebi.ac.uk/pdbsum/5hf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hf4 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5hf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hf4 OCA], [http://pdbe.org/5hf4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hf4 RCSB], [http://www.ebi.ac.uk/pdbsum/5hf4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hf4 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/DLG4_RAT DLG4_RAT]] Interacts with the cytoplasmic tail of NMDA receptor subunits and shaker-type potassium channels. Required for synaptic plasticity associated with NMDA receptor signaling. Overexpression or depletion of DLG4 changes the ratio of excitatory to inhibitory synapses in hippocampal neurons. May reduce the amplitude of ASIC3 acid-evoked currents by retaining the channel intracellularly. May regulate the intracellular trafficking of ADR1B.<ref>PMID:15317815</ref> <ref>PMID:15358863</ref>
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[https://www.uniprot.org/uniprot/DLG4_RAT DLG4_RAT] Interacts with the cytoplasmic tail of NMDA receptor subunits and shaker-type potassium channels. Required for synaptic plasticity associated with NMDA receptor signaling. Overexpression or depletion of DLG4 changes the ratio of excitatory to inhibitory synapses in hippocampal neurons. May reduce the amplitude of ASIC3 acid-evoked currents by retaining the channel intracellularly. May regulate the intracellular trafficking of ADR1B.<ref>PMID:15317815</ref> <ref>PMID:15358863</ref>
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==See Also==
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*[[Postsynaptic density protein 3D structures|Postsynaptic density protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Buffalo rat]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Raman, A S]]
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[[Category: Rattus norvegicus]]
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[[Category: Ranganathan, R]]
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[[Category: Raman AS]]
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[[Category: White, K I]]
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[[Category: Ranganathan R]]
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[[Category: Adhesion]]
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[[Category: White KI]]
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[[Category: Dhr]]
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[[Category: Glgf]]
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[[Category: Pdz]]
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[[Category: Peptide binding protein]]
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[[Category: Peptide-binding domain]]
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[[Category: Synapse]]
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[[Category: Synaptic density]]
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Current revision

The third PDZ domain from the synaptic protein PSD-95 (H372A mutant)

PDB ID 5hf4

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