This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5hop

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:49, 16 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5hop' size='340' side='right'caption='[[5hop]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='5hop' size='340' side='right'caption='[[5hop]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5hop]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lismo Lismo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HOP OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5HOP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5hop]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HOP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HOP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lmo0182 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=169963 LISMO])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hop OCA], [https://pdbe.org/5hop PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hop RCSB], [https://www.ebi.ac.uk/pdbsum/5hop PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hop ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5hop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hop OCA], [http://pdbe.org/5hop PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hop RCSB], [http://www.ebi.ac.uk/pdbsum/5hop PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hop ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8YAE8_LISMO Q8YAE8_LISMO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lismo]]
+
[[Category: Listeria monocytogenes EGD-e]]
-
[[Category: Anderson, W F]]
+
[[Category: Anderson WF]]
-
[[Category: Structural genomic]]
+
[[Category: Grimshaw S]]
-
[[Category: Grimshaw, S]]
+
[[Category: Halavaty AS]]
-
[[Category: Halavaty, A S]]
+
[[Category: Kwon K]]
-
[[Category: Kwon, K]]
+
[[Category: Light SH]]
-
[[Category: Light, S H]]
+
[[Category: Minasov G]]
-
[[Category: Minasov, G]]
+
-
[[Category: Csgid]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Listeria monocytogenes egd-e]]
+
-
[[Category: Lmo0182]]
+

Current revision

1.65 Angstrom resolution crystal structure of lmo0182 (residues 1-245) from Listeria monocytogenes EGD-e

PDB ID 5hop

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools