This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5hp6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:49, 16 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5hp6' size='340' side='right'caption='[[5hp6]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
<StructureSection load='5hp6' size='340' side='right'caption='[[5hp6]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5hp6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HP6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5HP6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5hp6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HP6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HP6 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.093&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ho0|5ho0]], [[5ho2|5ho2]], [[5ho9|5ho9]], [[5hof|5hof]], [[5hon|5hon]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">abnA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 ATCC 12980])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hp6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hp6 OCA], [https://pdbe.org/5hp6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hp6 RCSB], [https://www.ebi.ac.uk/pdbsum/5hp6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hp6 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5hp6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hp6 OCA], [http://pdbe.org/5hp6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hp6 RCSB], [http://www.ebi.ac.uk/pdbsum/5hp6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hp6 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/B3EYN2_GEOSE B3EYN2_GEOSE]
==See Also==
==See Also==
Line 14: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 12980]]
 
-
[[Category: Large Structures]]
 
-
[[Category: Lansky, S]]
 
-
[[Category: Salama, R]]
 
-
[[Category: Shoham, G]]
 
-
[[Category: Shoham, Y]]
 
-
[[Category: Shwartstien, O]]
 
-
[[Category: Arabinanase]]
 
-
[[Category: Extracellular]]
 
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Gh43]]
+
[[Category: Large Structures]]
-
[[Category: Hydrolase]]
+
[[Category: Lansky S]]
 +
[[Category: Salama R]]
 +
[[Category: Shoham G]]
 +
[[Category: Shoham Y]]
 +
[[Category: Shwartstien O]]

Current revision

Structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus (a new conformational state)

PDB ID 5hp6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools