Aldolase 3D structures
From Proteopedia
(Difference between revisions)
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**[[4d2j]], [[4tu1]], [[5tjs]] – TgFBPA – ''Toxoplasma gondii''<br /> | **[[4d2j]], [[4tu1]], [[5tjs]] – TgFBPA – ''Toxoplasma gondii''<br /> | ||
**[[5u4n]] – FBPA – ''Neisseria gonorrhoeae''<br /> | **[[5u4n]] – FBPA – ''Neisseria gonorrhoeae''<br /> | ||
| + | **[[6lnk]] – FBPA – ''Candida albicans''<br /> | ||
*FBPA complex | *FBPA complex | ||
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**[[3n9r]], [[3n9s]], [[3c52]], [[3c56]] - HpFBPA + inhibitor<br /> | **[[3n9r]], [[3n9s]], [[3c52]], [[3c56]] - HpFBPA + inhibitor<br /> | ||
**[[3mmt]] – FBPA + FBP – ''Bartonella henselae''<br /> | **[[3mmt]] – FBPA + FBP – ''Bartonella henselae''<br /> | ||
| + | **[[7nc7]] – FBPA + dihydroxyacetonephosphate – ''Bacillus methanolicus''<br /> | ||
*Fructose–6-phosphate aldolase | *Fructose–6-phosphate aldolase | ||
| - | **[[4s1f]] – EcF6PA 1 <br /> | + | **[[1l6w]], [[4s1f]] – EcF6PA 1 <br /> |
| - | **[[4rz4]], [[4rxg]], [[4rxf]] – EcF6PA 1 (mutant)<br /> | + | **[[4rz4]], [[4rxg]], [[4rxf]], [[5zol]] – EcF6PA 1 (mutant)<br /> |
*Deoxyribose-phosphate aldolase | *Deoxyribose-phosphate aldolase | ||
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**[[2a4a]] – DERA – ''Plasmodium yoelii''<br /> | **[[2a4a]] – DERA – ''Plasmodium yoelii''<br /> | ||
**[[1vcv]] – DERA – ''Pyrobaculum aerophilum''<br /> | **[[1vcv]] – DERA – ''Pyrobaculum aerophilum''<br /> | ||
| - | **[[1p1x]], [[1ktn]], [[3npu]], [[3npv]], [[3npw]], [[3npx]], [[3nq2]], [[3nq8]], [[3nqv]], [[3nr0]], [[3q2d]] – EcDERA<br /> | + | **[[1p1x]], [[1ktn]], [[3npu]], [[3npv]], [[3npw]], [[3npx]], [[3nq2]], [[3nq8]], [[3nqv]], [[3nr0]], [[3q2d]], [[6z9j]] – EcDERA<br /> |
| - | **[[5emu]], [[5el1]], [[5eky]] - EcDERA (mutant)<br /> | + | **[[5emu]], [[5el1]], [[5eky]], [[6z9h]] - EcDERA (mutant)<br /> |
**[[1jcj]], [[1jcl]] – EcDERA (mutant) + reaction intermediate<br /> | **[[1jcj]], [[1jcl]] – EcDERA (mutant) + reaction intermediate<br /> | ||
| + | **[[6z9i]] - EcDERA (mutant) + G3P<br /> | ||
**[[1n7k]] – ApDERA – ''Aeropyrum pernix''<br /> | **[[1n7k]] – ApDERA – ''Aeropyrum pernix''<br /> | ||
**[[1mzh]] – AaDERA - ''Aquifex aeolicus''<br /> | **[[1mzh]] – AaDERA - ''Aquifex aeolicus''<br /> | ||
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**[[5c6m]] – DERA – ''Shewanella halifasensis''<br /> | **[[5c6m]] – DERA – ''Shewanella halifasensis''<br /> | ||
**[[5c5y]], [[5c2x]] – DERA – ''Colwellia psychrerythraea''<br /> | **[[5c5y]], [[5c2x]] – DERA – ''Colwellia psychrerythraea''<br /> | ||
| - | **[[6msw]] – | + | **[[6d33]] – BhDERA – ''Bacillus halodurans''<br /> |
| + | **[[6msw]] – BhDERA (mutant) – ''Bacillus halodurans''<br /> | ||
| - | * | + | *Dihydroneopterin aldolase |
**[[1sql]] – AtDHNPA + guanine <br /> | **[[1sql]] – AtDHNPA + guanine <br /> | ||
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**[[4lrs]], [[4lrt]] – OVA + acetaldehyde dehydrogenase – ''Thermomonospora curvata''<br /> | **[[4lrs]], [[4lrt]] – OVA + acetaldehyde dehydrogenase – ''Thermomonospora curvata''<br /> | ||
| - | *keto- | + | *2-keto-3-deoxy-6-phosphogluconate aldolase (KDPG) |
**[[3nzr]] – KDPG – ''Vibrio fischeri''<br /> | **[[3nzr]] – KDPG – ''Vibrio fischeri''<br /> | ||
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**[[5xsf]] - ZmKDPG + pyruvate <br /> | **[[5xsf]] - ZmKDPG + pyruvate <br /> | ||
**[[6ovi]] - KDPG + pyruvate derivative – ''Legionella pneumophila''<br /> | **[[6ovi]] - KDPG + pyruvate derivative – ''Legionella pneumophila''<br /> | ||
| + | **[[6g3z]] – SsKDPG + KDPG - ''Sulfolobus solfataricus'' <br /> | ||
| - | *keto-deoxygluconate aldolase (KDG) | + | *2-keto-3-deoxygluconate aldolase (KDG) |
**[[2nuw]], [[2nux]] – SaKDG – ''Sulfolobus acidocaldarius''<br /> | **[[2nuw]], [[2nux]] – SaKDG – ''Sulfolobus acidocaldarius''<br /> | ||
**[[2nuy]] – SaKDG + pyruvate <br /> | **[[2nuy]] – SaKDG + pyruvate <br /> | ||
| - | **[[1w37]] - SsDDPGA – | + | **[[1w37]] - SsDDPGA <br /> |
| + | **[[6gso]], [[6gt8]], [[6h2r]], [[6h7r]] – SsKDG (mutant)<br /> | ||
| + | **[[6h7s]] – SsKDG (mutant) + KDG<br /> | ||
| + | **[[6gv2]] – SsKDG (mutant) + KD-galactonate<br /> | ||
| + | **[[6g3z]] – SsKDG + KDPG<br /> | ||
**[[1w3i]] - SsKDG + pyruvate <br /> | **[[1w3i]] - SsKDG + pyruvate <br /> | ||
| + | **[[6h2s]] - SsKDG (mutant) + pyruvate <br /> | ||
**[[1w3n]] - SsKDG + gluconate<br /> | **[[1w3n]] - SsKDG + gluconate<br /> | ||
**[[1w3t]] - SsKDG + gluconate + pyruvate <br /> | **[[1w3t]] - SsKDG + gluconate + pyruvate <br /> | ||
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**See [[Kdo-8-phosphate synthase]] | **See [[Kdo-8-phosphate synthase]] | ||
| - | * | + | *2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
**[[2v81]] – EcKDPGAL<br /> | **[[2v81]] – EcKDPGAL<br /> | ||
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**[[6btg]] – BtFPA + DHAP <br /> | **[[6btg]] – BtFPA + DHAP <br /> | ||
| - | * | + | *Sphingosine-1-phosphate Aldolase or Sphingosine-1-phosphate lyase |
**[[3mc6]] – ySCDPL1 (mutant) <br /> | **[[3mc6]] – ySCDPL1 (mutant) <br /> | ||
| + | **[[4q6r]] – hSPL + inhibitor<br /> | ||
*Rhamnulose-1-phosphate aldolase | *Rhamnulose-1-phosphate aldolase | ||
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**[[2v9g]], [[2v9o]], [[2uyu]], [[2uyv]], [[2v9e]], [[2v9f]], [[2v9i]], [[2v9l]], [[2v9m]], [[2v9n]], [[2v29]], [[2v2a]], [[2v2b]], [[1ojr]] – EcRPA (mutant)<br /> | **[[2v9g]], [[2v9o]], [[2uyu]], [[2uyv]], [[2v9e]], [[2v9f]], [[2v9i]], [[2v9l]], [[2v9m]], [[2v9n]], [[2v29]], [[2v2a]], [[2v2b]], [[1ojr]] – EcRPA (mutant)<br /> | ||
| - | * | + | *4-hydroxy-2-oxoglutarate aldolase |
**[[3s5n]], [[3s5o]] - hOGA<br /> | **[[3s5n]], [[3s5o]] - hOGA<br /> | ||
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**[[3gkf]] – EcLsrFA<br /> | **[[3gkf]] – EcLsrFA<br /> | ||
**[[3glc]], [[3gnd]] – EcLsrFA + ribose derivative<br /> | **[[3glc]], [[3gnd]] – EcLsrFA + ribose derivative<br /> | ||
| + | **[[4p2v]] – EcLsrF (mutant) + hydroxt dioxopentyl dihydrogen phosphate <br /> | ||
* Hydroxyaspartate aldolase | * Hydroxyaspartate aldolase | ||
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**[[4v15]] – ThrA – ''Achromobacter xylosoxidans''<br /> | **[[4v15]] – ThrA – ''Achromobacter xylosoxidans''<br /> | ||
**[[5vye]] – PpThrA + pyridoxime derivative<br /> | **[[5vye]] – PpThrA + pyridoxime derivative<br /> | ||
| + | **[[7k34]] – ThrA – ''Pseudomonas fluorescens''<br /> | ||
*Phenylserine aldolase | *Phenylserine aldolase | ||
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*Retro-aldolase | *Retro-aldolase | ||
| - | **[[3nxf]], [[3o6y]], [[3ud6]], [[4pek]], [[4pej]], [[4pa8]] – RA – artificial gene<br /> | + | **[[3b5l]], [[3hoj]], [[3nxf]], [[3o6y]], [[3ud6]], [[4a29]], [[4pek]], [[4pej]], [[4pa8]] – RA – artificial gene<br /> |
| - | **[[4ou1]] – SsRA<br /> | + | **[[4ou1]], [[4a2r]], [[4a2s]], [[4pa8]], [[5aou]], [[6tfa]] – SsRA<br /> |
| + | **[[5an7]] – SsRA + inhibitor<br /> | ||
| + | **[[4cdl]] – PpRA + inhibitor<br /> | ||
*17-alpha-hydroxyprogesterone aldolase (steroid 17-alpha-hydroxylase /17,20 lyase) see [[Cytochrome P450]] | *17-alpha-hydroxyprogesterone aldolase (steroid 17-alpha-hydroxylase /17,20 lyase) see [[Cytochrome P450]] | ||
}} | }} | ||
[[Category: Topic Page]] | [[Category: Topic Page]] | ||
Revision as of 08:56, 14 March 2021
3D structures of Aldolase
Updated on 14-March-2021
