We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

5i78

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:25, 23 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5i78' size='340' side='right'caption='[[5i78]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
<StructureSection load='5i78' size='340' side='right'caption='[[5i78]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5i78]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/A._niger A. niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I78 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5I78 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5i78]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_niger Aspergillus niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I78 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5I78 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.58&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5i79|5i79]], [[5i77|5i77]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">eg1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5061 A. niger])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5i78 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i78 OCA], [https://pdbe.org/5i78 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5i78 RCSB], [https://www.ebi.ac.uk/pdbsum/5i78 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5i78 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5i78 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i78 OCA], [http://pdbe.org/5i78 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5i78 RCSB], [http://www.ebi.ac.uk/pdbsum/5i78 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5i78 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/EGLB_ASPNG EGLB_ASPNG] Has endoglucanase activity on substrates containing beta-1,4 glycosidic bonds, like in carboxymethylcellulose (CMC), hydroxyethylcellulose (HEC) and beta-glucan. Involved in the degradation of complex natural cellulosic substrates.<ref>PMID:16233124</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: A. niger]]
+
[[Category: Aspergillus niger]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Chen, C C]]
+
[[Category: Chen CC]]
-
[[Category: Guo, R T]]
+
[[Category: Guo RT]]
-
[[Category: Li, Y J]]
+
[[Category: Li YJ]]
-
[[Category: Liu, W D]]
+
[[Category: Liu WD]]
-
[[Category: Yan, J J]]
+
[[Category: Yan JJ]]
-
[[Category: Zheng, Y Y]]
+
[[Category: Zheng YY]]
-
[[Category: Endoglucanase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Substrate binding]]
+

Current revision

Crystal structure of a beta-1,4-endoglucanase from Aspergillus niger

PDB ID 5i78

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5i78"
Personal tools