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5imb

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Current revision (14:01, 30 August 2023) (edit) (undo)
 
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<StructureSection load='5imb' size='340' side='right'caption='[[5imb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='5imb' size='340' side='right'caption='[[5imb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5imb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IMB OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5IMB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5imb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IMB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IMB FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pth, VC_2184 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aminoacyl-tRNA_hydrolase Aminoacyl-tRNA hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.29 3.1.1.29] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5imb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5imb OCA], [https://pdbe.org/5imb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5imb RCSB], [https://www.ebi.ac.uk/pdbsum/5imb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5imb ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5imb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5imb OCA], [http://pdbe.org/5imb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5imb RCSB], [http://www.ebi.ac.uk/pdbsum/5imb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5imb ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/PTH_VIBCH PTH_VIBCH]] The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.
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[https://www.uniprot.org/uniprot/PTH_VIBCH PTH_VIBCH] The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aminoacyl-tRNA hydrolase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Vibch]]
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[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
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[[Category: Arora, A]]
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[[Category: Arora A]]
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[[Category: Kabra, A]]
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[[Category: Kabra A]]
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[[Category: Pal, R K]]
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[[Category: Pal RK]]
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[[Category: Shahid, S]]
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[[Category: Shahid S]]
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[[Category: Hydrolase]]
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[[Category: N14d mutant]]
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[[Category: Peptidyl-trna hydrolase]]
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[[Category: Vibrio cholerae]]
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Current revision

Crystal structure of peptidyl-tRNA hydrolase mutant-N14D from Vibrio cholerae

PDB ID 5imb

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OCA

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