6x8m
From Proteopedia
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==CryoEM structure of the holo-SrpI encapsulin complex from Synechococcus elongatus PCC 7942== | ==CryoEM structure of the holo-SrpI encapsulin complex from Synechococcus elongatus PCC 7942== | ||
- | <StructureSection load='6x8m' size='340' side='right'caption='[[6x8m]]' scene=''> | + | <StructureSection load='6x8m' size='340' side='right'caption='[[6x8m]], [[Resolution|resolution]] 2.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6X8M OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6x8m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Anacystis_nidulans_r2 Anacystis nidulans r2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6X8M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6X8M FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">srpI, Synpcc7942_B2662, pANL38 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1140 Anacystis nidulans R2])</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6x8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6x8m OCA], [https://pdbe.org/6x8m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6x8m RCSB], [https://www.ebi.ac.uk/pdbsum/6x8m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6x8m ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Prokaryotic nanocompartments, also known as encapsulins, are a recently discovered proteinaceous organelle-like compartments in prokaryotes that compartmentalize cargo enzymes. While initial studies have begun to elucidate the structure and physiological roles of encapsulins, bioinformatic evidence suggests that a great diversity of encapsulin nanocompartments remains unexplored. Here, we describe a novel encapsulin in the freshwater cyanobacterium Synechococcus elongatus PCC 7942. This nanocompartment is upregulated upon sulfate starvation and encapsulates a cysteine desulfurase enzyme via an N-terminal targeting sequence. Using cryo-electron microscopy, we have determined the structure of the nanocompartment complex to 2.2 A resolution. Lastly, biochemical characterization of the complex demonstrated that the activity of the cysteine desulfurase is enhanced upon encapsulation. Taken together, our discovery, structural analysis, and enzymatic characterization of this prokaryotic nanocompartment provide a foundation for future studies seeking to understand the physiological role of this encapsulin in various bacteria. | ||
+ | |||
+ | Discovery and characterization of a novel family of prokaryotic nanocompartments involved in sulfur metabolism.,Nichols RJ, LaFrance B, Phillips NR, Radford DR, Oltrogge LM, Valentin-Alvarado LE, Bischoff AJ, Nogales E, Savage DF Elife. 2021 Apr 6;10. pii: 59288. doi: 10.7554/eLife.59288. PMID:33821786<ref>PMID:33821786</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6x8m" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Anacystis nidulans r2]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Bischoff | + | [[Category: Bischoff, A J]] |
- | [[Category: LaFrance | + | [[Category: LaFrance, B J]] |
- | [[Category: Nichols | + | [[Category: Nichols, R J]] |
- | [[Category: Nogales E]] | + | [[Category: Nogales, E]] |
- | [[Category: Oltrogge | + | [[Category: Oltrogge, L M]] |
- | [[Category: Phillips | + | [[Category: Phillips, N R]] |
- | [[Category: Savage | + | [[Category: Savage, D F]] |
- | [[Category: Valentin-Alvarado | + | [[Category: Valentin-Alvarado, L E]] |
+ | [[Category: Cysteine desulfurase]] | ||
+ | [[Category: Encapsulin]] | ||
+ | [[Category: Hk97-fold]] | ||
+ | [[Category: Nanocompartment]] | ||
+ | [[Category: Virus like particle]] |
Revision as of 08:28, 21 April 2021
CryoEM structure of the holo-SrpI encapsulin complex from Synechococcus elongatus PCC 7942
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