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| | <StructureSection load='5jjf' size='340' side='right'caption='[[5jjf]], [[Resolution|resolution]] 1.90Å' scene=''> | | <StructureSection load='5jjf' size='340' side='right'caption='[[5jjf]], [[Resolution|resolution]] 1.90Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[5jjf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35678 Atcc 35678]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JJF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5JJF FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5jjf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Natronomonas_pharaonis Natronomonas pharaonis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JJF FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=LFA:EICOSANE'>LFA</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sop2, sopII ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2257 ATCC 35678]), htr2, htrII ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2257 ATCC 35678])</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=LFA:EICOSANE'>LFA</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5jjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jjf OCA], [http://pdbe.org/5jjf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jjf RCSB], [http://www.ebi.ac.uk/pdbsum/5jjf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jjf ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jjf OCA], [https://pdbe.org/5jjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jjf RCSB], [https://www.ebi.ac.uk/pdbsum/5jjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jjf ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/BACS2_NATPH BACS2_NATPH]] Involved in the control of phototaxis. Seems to activate a methyl-accepting protein (HTR-II). Photoreceptor for blue light. [[http://www.uniprot.org/uniprot/HTR2_NATPH HTR2_NATPH]] Transduces signals from the phototaxis receptor sensory rhodopsin II (SR-II) to the flagellar motor. Responds to light changes through the variation of the level of methylation. Also acts as a chemotransducer. | + | [https://www.uniprot.org/uniprot/BACS2_NATPH BACS2_NATPH] Involved in the control of phototaxis. Seems to activate a methyl-accepting protein (HTR-II). Photoreceptor for blue light. |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Atcc 35678]] | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Balandin, T]] | + | [[Category: Natronomonas pharaonis]] |
| - | [[Category: Borshchevskiy, V]] | + | [[Category: Balandin T]] |
| - | [[Category: Bueldt, G]] | + | [[Category: Borshchevskiy V]] |
| - | [[Category: Engelhard, M]] | + | [[Category: Bueldt G]] |
| - | [[Category: Gordeliy, V]] | + | [[Category: Engelhard M]] |
| - | [[Category: Grudinin, S]] | + | [[Category: Gordeliy V]] |
| - | [[Category: Gushchin, I]] | + | [[Category: Grudinin S]] |
| - | [[Category: Ishchenko, A]] | + | [[Category: Gushchin I]] |
| - | [[Category: Klare, J]] | + | [[Category: Ishchenko A]] |
| - | [[Category: Polovinkin, V]] | + | [[Category: Klare J]] |
| - | [[Category: Remeeva, A]] | + | [[Category: Polovinkin V]] |
| - | [[Category: Round, E]] | + | [[Category: Remeeva A]] |
| - | [[Category: Utrobin, P]] | + | [[Category: Round E]] |
| - | [[Category: Membrane protein complex]]
| + | [[Category: Utrobin P]] |
| - | [[Category: Sensory rhodopsin ii]]
| + | |
| - | [[Category: Signaling protein]]
| + | |
| - | [[Category: Transducer]]
| + | |
| Structural highlights
Function
BACS2_NATPH Involved in the control of phototaxis. Seems to activate a methyl-accepting protein (HTR-II). Photoreceptor for blue light.
Publication Abstract from PubMed
The complex of two membrane proteins, sensory rhodopsin II (NpSRII) with its cognate transducer (NpHtrII), mediates negative phototaxis in halobacteria N. pharaonis. Upon light activation NpSRII triggers a signal transduction chain homologous to the two-component system in eubacterial chemotaxis. Here we report on crystal structures of the ground and active M-state of the complex in the space group I212121. We demonstrate that the relative orientation of symmetrical parts of the dimer is parallel ("U"-shaped) contrary to the gusset-like ("V"-shaped) form of the previously reported structures of the NpSRII/NpHtrII complex in the space group P21212, although the structures of the monomers taken individually are nearly the same. Computer modeling of the HAMP domain in the obtained "V"- and "U"-shaped structures revealed that only the "U"-shaped conformation allows for tight interactions of the receptor with the HAMP domain. This is in line with existing data and supports biological relevance of the "U" shape in the ground state. We suggest that the "V"-shaped structure may correspond to the active state of the complex and transition from the "U" to the "V"-shape of the receptor-transducer complex can be involved in signal transduction from the receptor to the signaling domain of NpHtrII.
New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.,Ishchenko A, Round E, Borshchevskiy V, Grudinin S, Gushchin I, Klare JP, Remeeva A, Polovinkin V, Utrobin P, Balandin T, Engelhard M, Buldt G, Gordeliy V Sci Rep. 2017 Feb 6;7:41811. doi: 10.1038/srep41811. PMID:28165484[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Ishchenko A, Round E, Borshchevskiy V, Grudinin S, Gushchin I, Klare JP, Remeeva A, Polovinkin V, Utrobin P, Balandin T, Engelhard M, Buldt G, Gordeliy V. New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex. Sci Rep. 2017 Feb 6;7:41811. doi: 10.1038/srep41811. PMID:28165484 doi:http://dx.doi.org/10.1038/srep41811
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