This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5jxn
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='5jxn' size='340' side='right'caption='[[5jxn]], [[Resolution|resolution]] 1.38Å' scene=''> | <StructureSection load='5jxn' size='340' side='right'caption='[[5jxn]], [[Resolution|resolution]] 1.38Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5jxn]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5jxn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_thermoproteolyticus Bacillus thermoproteolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JXN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JXN FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6NN:P-((((BENZYLOXY)CARBONYL)AMINO)METHYL)-N-((S)-4-METHYL-1-(((R)-2-METHYLBUTYL)AMINO)-1-OXOPENTAN-+2-YL)PHOSPHONAMIDIC+ACID'>6NN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.38Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6NN:P-((((BENZYLOXY)CARBONYL)AMINO)METHYL)-N-((S)-4-METHYL-1-(((R)-2-METHYLBUTYL)AMINO)-1-OXOPENTAN-+2-YL)PHOSPHONAMIDIC+ACID'>6NN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jxn OCA], [https://pdbe.org/5jxn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jxn RCSB], [https://www.ebi.ac.uk/pdbsum/5jxn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jxn ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/THER_BACTH THER_BACTH] Extracellular zinc metalloprotease. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 19: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 5jxn" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5jxn" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Thermolysin 3D structures|Thermolysin 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
| Line 25: | Line 28: | ||
[[Category: Bacillus thermoproteolyticus]] | [[Category: Bacillus thermoproteolyticus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | + | [[Category: Cramer J]] | |
| - | [[Category: Cramer | + | [[Category: Heine A]] |
| - | [[Category: Heine | + | [[Category: Klebe G]] |
| - | [[Category: Klebe | + | [[Category: Krimmer SG]] |
| - | [[Category: Krimmer | + | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Thermolysin in complex with JC240.
| |||||||||||
