User:Rubens Koity Ito/Sandbox 1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 7: Line 7:
==Structure==
==Structure==
-
The zebrafish ß-catenin is constituted by 781 amino acids and contains a core of <scene name='84/845942/Betacatenin12armr_helixc/2'>12 armadillo repeats</scene> (R1, R2, R3, R4, R5,R6, R7, R8, R9, R10,R11, R12) domain and an alpha helix, the <scene name='84/845942/Betacatenin12armr_helixc/4'>helix-C</scene>, at the beginning of the ß-catenin C-terminal domain. The armadillo domain is made of three helices in each repeat and has a particular site which is positively charged, constituting the binding surface for the majority of ß-catenin ligands. <ref name="xing2009" />
+
The zebrafish ß-catenin is constituted by 781 amino acids and contains a core of <scene name='84/845942/Betacatenin12armr_helixc/2'>12 armadillo repeats</scene> (<scene name='84/845942/Betacatenin12armr_helixc_r1/1'>R1</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/2'>R2</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/3'>R3</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/4'>R4</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/5'>R5</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/6'>R6</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/7'>R7</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/8'>R8</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/9'>R9</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/10'>R10</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/11'>R11</scene>, <scene name='84/845942/Betacatenin12armr_helixc_r1/12'>R12</scene>) domain and an alpha helix, the <scene name='84/845942/Betacatenin12armr_helixc/4'>helix-C</scene>, at the beginning of the ß-catenin C-terminal domain. The armadillo domain is made of three helices in each repeat and has a particular site which is positively charged, constituting the binding surface for the majority of ß-catenin ligands. <ref name="xing2009" />
<scene name='84/845942/Betacatenin12armr_helixc/5'>The sequences of the protein terminal domains</scene> are less conserved than the armadillo repeat domain and mediate a subset of protein-protein interactions. It is observed that the <scene name='84/845942/Betacatenin12armr_helixc/4'>helix-C constitutes the C-terminal domain</scene>, and the <scene name='84/845942/Betacatenin12armr_helixc/6'>N terminus of armadillo repeat has an alpha helix</scene>. Both <scene name='84/845942/Betacatenin12armr_helixc/5'>N- and C-terminal domains</scene> do not interact with the armadillo repeat domain. <ref name="xing2009" />
<scene name='84/845942/Betacatenin12armr_helixc/5'>The sequences of the protein terminal domains</scene> are less conserved than the armadillo repeat domain and mediate a subset of protein-protein interactions. It is observed that the <scene name='84/845942/Betacatenin12armr_helixc/4'>helix-C constitutes the C-terminal domain</scene>, and the <scene name='84/845942/Betacatenin12armr_helixc/6'>N terminus of armadillo repeat has an alpha helix</scene>. Both <scene name='84/845942/Betacatenin12armr_helixc/5'>N- and C-terminal domains</scene> do not interact with the armadillo repeat domain. <ref name="xing2009" />

Revision as of 22:27, 17 June 2020

ß-catenin

ß-catenin plays essential role in cell adherens junctions - connecting cytoplasmic domains and actin cytoskeleton - and in the canonical Wnt pathway - related to embryonic development. Deregulation of this protein activity is associated with cancer and other diseases, for example, the upregulation of its transcriptional activity is stimulated in most colon cancers. Therefore, ß-catenin is an important target for developing treatment for multiple diseases, with considerable interest in its structure. [1]

Structure of ß-catenin from Zebrafish

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

Rubens Koity Ito

Personal tools