6tlb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Plasmodium falciparum lipocalin (PF3D7_0925900)==
==Plasmodium falciparum lipocalin (PF3D7_0925900)==
-
<StructureSection load='6tlb' size='340' side='right'caption='[[6tlb]]' scene=''>
+
<StructureSection load='6tlb' size='340' side='right'caption='[[6tlb]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TLB OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TLB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6tlb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Plaf7 Plaf7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TLB OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TLB FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tlb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tlb OCA], [http://pdbe.org/6tlb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tlb RCSB], [http://www.ebi.ac.uk/pdbsum/6tlb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tlb ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF3D7_0925900 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 PLAF7])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tlb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tlb OCA], [http://pdbe.org/6tlb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tlb RCSB], [http://www.ebi.ac.uk/pdbsum/6tlb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tlb ProSAT]</span></td></tr>
</table>
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Proteins of the lipocalin family are known to bind small hydrophobic ligands and are involved in various physiological processes ranging from lipid transport to oxidative stress responses. The genome of the malaria parasite Plasmodium falciparum contains a single protein PF3D7_0925900 with a lipocalin signature. Using crystallography and small-angle X-ray scattering, we show that the protein has a tetrameric structure of typical lipocalin monomers; hence we name it P. falciparum lipocalin (PfLCN). We show that PfLCN is expressed in the intraerythrocytic stages of the parasite and localizes to the parasitophorous and food vacuoles. Conditional knockdown of PfLCN impairs parasite development, which can be rescued by treatment with the radical scavenger Trolox or by temporal inhibition of hemoglobin digestion. This suggests a key function of PfLCN in counteracting oxidative stress-induced cell damage during multiplication of parasites within erythrocytes.
 +
 +
Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum.,Burda PC, Crosskey T, Lauk K, Zurborg A, Sohnchen C, Liffner B, Wilcke L, Pietsch E, Strauss J, Jeffries CM, Svergun DI, Wilson DW, Wilmanns M, Gilberger TW Cell Rep. 2020 Jun 23;31(12):107817. doi: 10.1016/j.celrep.2020.107817. PMID:32579913<ref>PMID:32579913</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6tlb" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Burda PC]]
+
[[Category: Plaf7]]
-
[[Category: Crosskey TD]]
+
[[Category: Burda, P C]]
-
[[Category: Gilberger TW]]
+
[[Category: Crosskey, T D]]
-
[[Category: Lauk K]]
+
[[Category: Gilberger, T W]]
-
[[Category: Wilmanns M]]
+
[[Category: Lauk, K]]
 +
[[Category: Wilmanns, M]]
 +
[[Category: Infection]]
 +
[[Category: Lipocalin]]
 +
[[Category: Malaria]]
 +
[[Category: Unknown function]]

Revision as of 11:34, 22 July 2020

Plasmodium falciparum lipocalin (PF3D7_0925900)

PDB ID 6tlb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools