This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6wnd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:31, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6wnd' size='340' side='right'caption='[[6wnd]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
<StructureSection load='6wnd' size='340' side='right'caption='[[6wnd]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6wnd]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Lyngbya_wollei Lyngbya wollei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WND OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6WND FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6wnd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Microseira_wollei Microseira wollei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WND OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WND FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=U5A:[(2Z,3aS,4R,6Z,10aR)-2,6-diiminooctahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methyl+carbamate'>U5A</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.18&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6wn3|6wn3]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=U5A:[(2Z,3aS,4R,6Z,10aR)-2,6-diiminooctahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methyl+carbamate'>U5A</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sxtDIOX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=467598 Lyngbya wollei])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wnd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wnd OCA], [https://pdbe.org/6wnd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wnd RCSB], [https://www.ebi.ac.uk/pdbsum/6wnd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wnd ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6wnd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wnd OCA], [http://pdbe.org/6wnd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6wnd RCSB], [http://www.ebi.ac.uk/pdbsum/6wnd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6wnd ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C3RVP5_9CYAN C3RVP5_9CYAN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lyngbya wollei]]
+
[[Category: Microseira wollei]]
-
[[Category: Bridwell-Rabb, J]]
+
[[Category: Bridwell-Rabb J]]
-
[[Category: Liu, J]]
+
[[Category: Liu J]]
-
[[Category: Biosynthetic protein]]
+
-
[[Category: Metalloprotein]]
+
-
[[Category: Natural product]]
+
-
[[Category: Rieske oxygenase]]
+
-
[[Category: Saxitoxin]]
+

Current revision

Structure of the Rieske non-heme iron oxygenase GxtA with dideoxysaxitoxin bound

PDB ID 6wnd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools