This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5zbm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:51, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5zbm' size='340' side='right'caption='[[5zbm]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='5zbm' size='340' side='right'caption='[[5zbm]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5zbm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Nicbe Nicbe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZBM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5ZBM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5zbm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_benthamiana Nicotiana benthamiana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZBM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZBM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GOX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4100 NICBE])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5zbm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zbm OCA], [http://pdbe.org/5zbm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zbm RCSB], [http://www.ebi.ac.uk/pdbsum/5zbm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zbm ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zbm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zbm OCA], [https://pdbe.org/5zbm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zbm RCSB], [https://www.ebi.ac.uk/pdbsum/5zbm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zbm ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/E1AXT8_NICBE E1AXT8_NICBE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Nicbe]]
+
[[Category: Nicotiana benthamiana]]
-
[[Category: Chen, Z]]
+
[[Category: Chen Z]]
-
[[Category: Liu, Y]]
+
[[Category: Liu Y]]
-
[[Category: Enzyme kinetic]]
+
-
[[Category: Oligomerization]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Sax]]
+

Current revision

Structure of glycolate oxidase containing FMN from Nicotiana benthamiana

PDB ID 5zbm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools