Elongation factor 3D structures
From Proteopedia
(Difference between revisions)
| Line 16: | Line 16: | ||
**[[1b23]] - TaEF + Cys-tRNA<BR /> | **[[1b23]] - TaEF + Cys-tRNA<BR /> | ||
**[[3wxm]] – ApEF + plethora protein – ''Aeropyrum pernix''<br /> | **[[3wxm]] – ApEF + plethora protein – ''Aeropyrum pernix''<br /> | ||
| + | **[[6ji2]] - ApEF + plethora protein + AP2<br /> | ||
**[[4h9g]], [[4lbv]], [[4lbw]], [[4lby]], [[4lbz]], [[4lc0]] – TtEF – ''Thermus thermophilus''<br /> | **[[4h9g]], [[4lbv]], [[4lbw]], [[4lby]], [[4lbz]], [[4lc0]] – TtEF – ''Thermus thermophilus''<br /> | ||
**[[4j0q]] – PpEF – ''Pseudomonas putida''<br /> | **[[4j0q]] – PpEF – ''Pseudomonas putida''<br /> | ||
**[[5w75]] – EF – ''Thermotoga neapolitana''<br /> | **[[5w75]] – EF – ''Thermotoga neapolitana''<br /> | ||
**[[5tbf]] – EF domain 2-3– ''Vibrio cholerae''<br /> | **[[5tbf]] – EF domain 2-3– ''Vibrio cholerae''<br /> | ||
| + | **[[6htw]], [[6i8r]] – EF – synthetic<br /> | ||
*''EF-Tu complex with antibiotics'' | *''EF-Tu complex with antibiotics'' | ||
| Line 146: | Line 148: | ||
**[[1yby]] – EF – ''Clostridium thermocellum''<br /> | **[[1yby]] – EF – ''Clostridium thermocellum''<br /> | ||
**[[5j3b]] – AbEF <br /> | **[[5j3b]] – AbEF <br /> | ||
| + | **[[6rji]] – SaEF <br /> | ||
| + | **[[6rk3]] – SaEF - NMR<br /> | ||
| + | **[[6s8z]] – EF – ''Corynebacterium glutamicum'' <br /> | ||
**[[5wxk]] – EF + EARP – ''Neisseria meningitidis''<br /> | **[[5wxk]] – EF + EARP – ''Neisseria meningitidis''<br /> | ||
| Line 166: | Line 171: | ||
**[[5bmu]] – hEF ε-1 + Glu tRNA ligase <br /> | **[[5bmu]] – hEF ε-1 + Glu tRNA ligase <br /> | ||
**[[5y6l]] – hEF ε-1 (mutant) + MetRS + AspRS + Glu/Pro tRNA ligase + P38<br /> | **[[5y6l]] – hEF ε-1 (mutant) + MetRS + AspRS + Glu/Pro tRNA ligase + P38<br /> | ||
| - | **[[4c0s]] – rEF α-2 – rabbit<br /> | + | **[[4c0s]], [[6ra9]] – rEF α-2 – rabbit<br /> |
**[[5o8w]] – yEF α+β <br /> | **[[5o8w]] – yEF α+β <br /> | ||
**[[1nhy]] – yEF γ N terminal<br /> | **[[1nhy]] – yEF γ N terminal<br /> | ||
| Line 183: | Line 188: | ||
**[[5h7l]] - PhEF + L12<BR /> | **[[5h7l]] - PhEF + L12<BR /> | ||
**[[5h7k]] - PhEF + GDP<BR /> | **[[5h7k]] - PhEF + GDP<BR /> | ||
| + | **[[6u45]] – MnEF + GMPPCP – ''Methanoperedens nitroreducens'' <BR /> | ||
| + | **[[6u43]], [[6u44]] – MnEF (mutant) + GMPPCP <BR /> | ||
*EF-3 | *EF-3 | ||
| Line 213: | Line 220: | ||
**[[3h7h]] – hEF-Spt4 residues 2-117 + hEF-Spt5 residues 176-273<br /> | **[[3h7h]] – hEF-Spt4 residues 2-117 + hEF-Spt5 residues 176-273<br /> | ||
| + | **[[6gmh]], [[6gml]] – hEF-Spt4 + EF-Spt5 + EF-Spt6 in transcription complex – Cryo EM<br /> | ||
**[[5oik]] – bEF-Spt4 + EF-Spt5 + RNA polymerase II <br /> | **[[5oik]] – bEF-Spt4 + EF-Spt5 + RNA polymerase II <br /> | ||
**[[2exu]] – yEF-Spt4 residues 1-99 + EF-Spt5 residues 285-375<br /> | **[[2exu]] – yEF-Spt4 residues 1-99 + EF-Spt5 residues 285-375<br /> | ||
**[[4zn3]], [[4zn1]] – EF-Spt4 + EF-Spt5 – ''Methanocaldococcus jannaschii'' <br /> | **[[4zn3]], [[4zn1]] – EF-Spt4 + EF-Spt5 – ''Methanocaldococcus jannaschii'' <br /> | ||
| - | **[[5xon]], [[5xog]] – EF-Spt4 + EF-Spt5 + EF-Tfiis | + | **[[5xon]], [[5xog]], [[6ir9]], [[6j4w]], [[6j4x]], [[6j4y]], [[6j4z]], [[6j50]], [[6j51]] – EF-Spt4 + EF-Spt5 + EF-Tfiis in RNA polymerase II elongation complex - ''Komagataella phaffii'' - Cryo EM<br /> |
*EF-Spt5 | *EF-Spt5 | ||
| Line 236: | Line 244: | ||
**[[4z2n]] – hEF middle domain residues 644-930<br /> | **[[4z2n]] – hEF middle domain residues 644-930<br /> | ||
**[[4z2m]] – hEF middle domain + histone H3.1 + histone H4<br /> | **[[4z2m]] – hEF middle domain + histone H3.1 + histone H4<br /> | ||
| + | **[[6gme]] – hEF SH2 domain residues 1317-1334<br /> | ||
**[[3psf]], [[3psi]] – yEF core domain residues 235-1259<BR /> | **[[3psf]], [[3psi]] – yEF core domain residues 235-1259<BR /> | ||
**[[3psj]], [[3psk]] – yEF SH2 domain residues 1247-1451<BR /> | **[[3psj]], [[3psk]] – yEF SH2 domain residues 1247-1451<BR /> | ||
| Line 276: | Line 285: | ||
**[[1lqb]], [[1lm8]] – hEloBC + von-Hippel Lindau disease tumor suppressor + hypoxia inducible factor 1 α<br /> | **[[1lqb]], [[1lm8]] – hEloBC + von-Hippel Lindau disease tumor suppressor + hypoxia inducible factor 1 α<br /> | ||
| + | **[[6i7q]], [[6i7r]] – hEloBC + von-Hippel Lindau disease tumor suppressor + hypoxia inducible factor 2 α<br /> | ||
**[[3zrc]], [[3ztc]], [[3ztd]], [[3zun]], [[6fmi]], [[6fmj]], [[6fmk]], [[5nw2]], [[5nw1]], [[5nw0]], [[5nvz]], [[5nvy]], [[5nvx]], [[5nvw]], [[5nvv]], [[4w9l]], [[4w9k]], [[4w9j]], [[4w9i]], [[4w9h]], [[4w9g]], [[4w9f]], [[4w9e]], [[4w9d]], [[4w9c]], [[6gfy]] - hEloBC + von-Hippel Lindau disease tumor suppressor + inhibitor<br /> | **[[3zrc]], [[3ztc]], [[3ztd]], [[3zun]], [[6fmi]], [[6fmj]], [[6fmk]], [[5nw2]], [[5nw1]], [[5nw0]], [[5nvz]], [[5nvy]], [[5nvx]], [[5nvw]], [[5nvv]], [[4w9l]], [[4w9k]], [[4w9j]], [[4w9i]], [[4w9h]], [[4w9g]], [[4w9f]], [[4w9e]], [[4w9d]], [[4w9c]], [[6gfy]] - hEloBC + von-Hippel Lindau disease tumor suppressor + inhibitor<br /> | ||
| - | **[[5t35]] - hEloBC + von-Hippel Lindau disease tumor suppressor + BRD4<br /> | + | **[[5t35]], [[6sis]] - hEloBC + von-Hippel Lindau disease tumor suppressor + BRD4<br /> |
**[[4wqo]] - hEloBC + von-Hippel Lindau disease tumor suppressor + cullin-2 <br /> | **[[4wqo]] - hEloBC + von-Hippel Lindau disease tumor suppressor + cullin-2 <br /> | ||
**[[6hr2]], [[6hay]], [[6hax]] - hEloBC + von-Hippel Lindau disease tumor suppressor + transcription activator <br /> | **[[6hr2]], [[6hay]], [[6hax]] - hEloBC + von-Hippel Lindau disease tumor suppressor + transcription activator <br /> | ||
| Line 287: | Line 297: | ||
**[[6i5n]], [[6i5j]] – hEloBC + suppressor of cytokine signaling + growth hormone receptor peptide<br /> | **[[6i5n]], [[6i5j]] – hEloBC + suppressor of cytokine signaling + growth hormone receptor peptide<br /> | ||
**[[6i4x]] – hEloBC + suppressor of cytokine signaling + erythropoietin peptide<br /> | **[[6i4x]] – hEloBC + suppressor of cytokine signaling + erythropoietin peptide<br /> | ||
| - | **[[ | + | **[[6p59]] - hEloBC + virion infectivity factor + CBF b<br /> |
**[[3zkj]] - hEloBC + ankyrin rep<br /> | **[[3zkj]] - hEloBC + ankyrin rep<br /> | ||
**[[1vcb]] – hEloBC + VHL<br /> | **[[1vcb]] – hEloBC + VHL<br /> | ||
| + | **[[6v9h]] – hEloBC + creatine kinase + ASB-9 – Cryo EM<br /> | ||
**[[2fnj]] - mEloBC + GUSTAVUS | **[[2fnj]] - mEloBC + GUSTAVUS | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 10:27, 20 July 2020
3D structures of elongation factor
Updated on 20-July-2020
