6yjp

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Current revision (13:28, 24 January 2024) (edit) (undo)
 
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==Crystal structure of a complex between glycosylated NKp30 and its deglycosylated tumour ligand B7-H6==
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<StructureSection load='6yjp' size='340' side='right'caption='[[6yjp]]' scene=''>
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<StructureSection load='6yjp' size='340' side='right'caption='[[6yjp]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6yjp]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YJP FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6yjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yjp OCA], [http://pdbe.org/6yjp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6yjp RCSB], [http://www.ebi.ac.uk/pdbsum/6yjp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6yjp ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yjp OCA], [https://pdbe.org/6yjp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yjp RCSB], [https://www.ebi.ac.uk/pdbsum/6yjp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yjp ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/NR3L1_HUMAN NR3L1_HUMAN] Triggers NCR3-dependent natural killer cell activation.<ref>PMID:19528259</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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NKp30 is one of the main human natural killer (NK) cell activating receptors used in directed immunotherapy. The oligomerization of the NKp30 ligand binding domain depends on the length of the C-terminal stalk region, but our structural knowledge of NKp30 oligomerization and its role in signal transduction remains limited. Moreover, ligand binding of NKp30 is affected by the presence and type of N-glycosylation. In this study, we assessed whether NKp30 oligomerization depends on its N-glycosylation. Our results show that NKp30 forms oligomers when expressed in HEK293S GnTI(-) cell lines with simple N-glycans. However, NKp30 was detected only as monomers after enzymatic deglycosylation. Furthermore, we characterized the interaction between NKp30 and its best-studied cognate ligand, B7-H6, with respect to glycosylation and oligomerization, and we solved the crystal structure of this complex with glycosylated NKp30, revealing a new glycosylation-induced mode of NKp30 dimerization. Overall, this study provides new insights into the structural basis of NKp30 oligomerization and explains how the stalk region and glycosylation of NKp30 affect its ligand affinity. This furthers our understanding of the molecular mechanisms involved in NK cell activation, which is crucial for the successful design of novel NK cell-based targeted immunotherapeutics.
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Natural Killer Cell Activation Receptor NKp30 Oligomerization Depends on Its N-Glycosylation.,Skorepa O, Pazicky S, Kalouskova B, Blaha J, Abreu C, Jecmen T, Rosulek M, Fish A, Sedivy A, Harlos K, Dohnalek J, Skalova T, Vanek O Cancers (Basel). 2020 Jul 21;12(7). pii: cancers12071998. doi:, 10.3390/cancers12071998. PMID:32708305<ref>PMID:32708305</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6yjp" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[NK cell receptor|NK cell receptor]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Z-disk]]
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[[Category: Blaha J]]
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[[Category: Dohnalek J]]
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[[Category: Kalouskova B]]
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[[Category: Pazicky S]]
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[[Category: Skalova T]]
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[[Category: Skorepa O]]
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[[Category: Vanek O]]

Current revision

Crystal structure of a complex between glycosylated NKp30 and its deglycosylated tumour ligand B7-H6

PDB ID 6yjp

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