6z6g
From Proteopedia
(Difference between revisions)
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- | ==== | + | ==Cryo-EM structure of La Crosse virus polymerase at pre-initiation stage== |
- | <StructureSection load='6z6g' size='340' side='right'caption='[[6z6g]]' scene=''> | + | <StructureSection load='6z6g' size='340' side='right'caption='[[6z6g]], [[Resolution|resolution]] 3.06Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6z6g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/La_Crosse_orthobunyavirus La Crosse orthobunyavirus] and [https://en.wikipedia.org/wiki/La_Crosse_virus La Crosse virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Z6G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Z6G FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.06Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6z6g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6z6g OCA], [https://pdbe.org/6z6g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6z6g RCSB], [https://www.ebi.ac.uk/pdbsum/6z6g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6z6g ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/L_BUNLC L_BUNLC] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Bunyavirales is an order of segmented negative-strand RNA viruses comprising several life-threatening pathogens against which no effective treatment is currently available. Replication and transcription of the RNA genome constitute essential processes performed by the virally encoded multi-domain RNA-dependent RNA polymerase. Here, we describe the complete high-resolution cryo-EM structure of La Crosse virus polymerase. It reveals the presence of key protruding C-terminal domains, notably the cap-binding domain, which undergoes large movements related to its role in transcription initiation, and a zinc-binding domain that displays a fold not previously observed. We capture the polymerase structure at pre-initiation and elongation states, uncovering the coordinated movement of the priming loop, mid-thumb ring linker and lid domain required for the establishment of a ten-base-pair template-product RNA duplex before strand separation into respective exit tunnels. These structural details and the observed dynamics of key functional elements will be instrumental for structure-based development of polymerase inhibitors. | ||
+ | |||
+ | Pre-initiation and elongation structures of full-length La Crosse virus polymerase reveal functionally important conformational changes.,Arragain B, Effantin G, Gerlach P, Reguera J, Schoehn G, Cusack S, Malet H Nat Commun. 2020 Jul 17;11(1):3590. doi: 10.1038/s41467-020-17349-4. PMID:32681014<ref>PMID:32681014</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6z6g" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[RNA polymerase 3D structures|RNA polymerase 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: La Crosse orthobunyavirus]] | ||
+ | [[Category: La Crosse virus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Arragain B]] |
+ | [[Category: Cusack S]] | ||
+ | [[Category: Effantin G]] | ||
+ | [[Category: Gerlach P]] | ||
+ | [[Category: Malet H]] | ||
+ | [[Category: Reguera J]] | ||
+ | [[Category: Schoehn G]] |
Current revision
Cryo-EM structure of La Crosse virus polymerase at pre-initiation stage
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