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5l2e

From Proteopedia

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Crystal structure of rat Glutamate receptor delta-2 extracellular domain

Structural highlights

5l2e is a 3 chain structure with sequence from Rattus norvegicus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 4.152Å
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

GRID2_RAT Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists.

Publication Abstract from PubMed

Synaptic specificity is a defining property of neural networks. In the cerebellum, synapses between parallel fiber neurons and Purkinje cells are specified by the simultaneous interactions of secreted protein cerebellin with pre-synaptic neurexin and post-synaptic delta-type glutamate receptors (GluD). Here, we determined the crystal structures of the trimeric C1q-like domain of rat cerebellin-1, and the first complete ectodomain of a GluD, rat GluD2. Cerebellin binds to the LNS6 domain of alpha- and beta-neurexin-1 through a high-affinity interaction that involves its highly flexible N-terminal domain. In contrast, we show that the interaction of cerebellin with isolated GluD2 ectodomain is low affinity, which is not simply an outcome of lost avidity when compared with binding with a tetrameric full-length receptor. Rather, high-affinity capture of cerebellin by post-synaptic terminals is likely controlled by long-distance regulation within this transsynaptic complex. Altogether, our results suggest unusual conformational flexibility within all components of the complex.

Conformational Plasticity in the Transsynaptic Neurexin-Cerebellin-Glutamate Receptor Adhesion Complex.,Cheng S, Seven AB, Wang J, Skiniotis G, Ozkan E Structure. 2016 Dec 6;24(12):2163-2173. doi: 10.1016/j.str.2016.11.004. PMID:27926833^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Cheng S, Seven AB, Wang J, Skiniotis G, Ozkan E. Conformational Plasticity in the Transsynaptic Neurexin-Cerebellin-Glutamate Receptor Adhesion Complex. Structure. 2016 Dec 6;24(12):2163-2173. doi: 10.1016/j.str.2016.11.004. PMID:27926833 doi:http://dx.doi.org/10.1016/j.str.2016.11.004

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 See Also
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5l2e"

Categories: Large Structures | Rattus norvegicus | Cheng S | Ozkan E

@@ Line 3: / Line 3: @@
 <StructureSection load='5l2e' size='340' side='right'caption='[[5l2e]], [[Resolution|resolution]] 4.15&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5l2e]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L2E OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5L2E FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5l2e]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L2E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5L2E FirstGlance]. <br>
-</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Grid2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4.152&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5l2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l2e OCA], [http://pdbe.org/5l2e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5l2e RCSB], [http://www.ebi.ac.uk/pdbsum/5l2e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5l2e ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5l2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l2e OCA], [https://pdbe.org/5l2e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5l2e RCSB], [https://www.ebi.ac.uk/pdbsum/5l2e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5l2e ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/GRID2_RAT GRID2_RAT]] Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists.
+[https://www.uniprot.org/uniprot/GRID2_RAT GRID2_RAT] Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 25: / Line 25: @@
 __TOC__
 </StructureSection>
-[[Category: Buffalo rat]]
 [[Category: Large Structures]]
-[[Category: Cheng, S]]
+[[Category: Rattus norvegicus]]
-[[Category: Ozkan, E]]
+[[Category: Cheng S]]
-[[Category: Cell surface protein]]
+[[Category: Ozkan E]]
-[[Category: Glycoprotein]]
-[[Category: Nervous system]]
-[[Category: Protein binding]]
-[[Category: Synapse protein]]

5l2e

From Proteopedia

Current revision

Crystal structure of rat Glutamate receptor delta-2 extracellular domain

Structural highlights

Function

Publication Abstract from PubMed

See Also

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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