This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5lhk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:26, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5lhk' size='340' side='right'caption='[[5lhk]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
<StructureSection load='5lhk' size='340' side='right'caption='[[5lhk]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5lhk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_sp._bc16019 Streptomyces sp. bc16019]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LHK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5LHK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5lhk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_sp._BC16019 Streptomyces sp. BC16019]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LHK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LHK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.32&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">botP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1109705 Streptomyces sp. BC16019])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5lhk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lhk OCA], [http://pdbe.org/5lhk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lhk RCSB], [http://www.ebi.ac.uk/pdbsum/5lhk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lhk ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lhk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lhk OCA], [https://pdbe.org/5lhk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lhk RCSB], [https://www.ebi.ac.uk/pdbsum/5lhk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lhk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/K4MHW2_9ACTN K4MHW2_9ACTN]] Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.[SAAS:SAAS00610869]
+
[https://www.uniprot.org/uniprot/K4MHW2_9ACTN K4MHW2_9ACTN] Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.[SAAS:SAAS00610869]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Streptomyces sp. bc16019]]
+
[[Category: Streptomyces sp. BC16019]]
-
[[Category: Adam, S]]
+
[[Category: Adam S]]
-
[[Category: Koehnke, J]]
+
[[Category: Koehnke J]]
-
[[Category: Botp]]
+
-
[[Category: Bottromycin]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Peptidase]]
+
-
[[Category: Ripp]]
+

Current revision

Bottromycin maturation enzyme BotP in complex with Mn

PDB ID 5lhk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5lhk"
Personal tools