Hemagglutinin 3D structures
From Proteopedia
(Difference between revisions)
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**[[1rwr]] – HA filamentous – ''Bordetella pertussis''<br /> | **[[1rwr]] – HA filamentous – ''Bordetella pertussis''<br /> | ||
**[[6efc]] – SgHA 220-453 – ''Streptococcus gordonii''<br /> | **[[6efc]] – SgHA 220-453 – ''Streptococcus gordonii''<br /> | ||
| - | **[[6efd]] – SgHA + trisaccharide<br /> | + | **[[6efd]], [[6x3k]] – SgHA + trisaccharide<br /> |
*Influenza hemagglutinin (IvHA) | *Influenza hemagglutinin (IvHA) | ||
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**[[4f23]] - IvHA precursor<br /> | **[[4f23]] - IvHA precursor<br /> | ||
**[[1ha0]] – IvHA precursor (mutant) <br /> | **[[1ha0]] – IvHA precursor (mutant) <br /> | ||
| - | **[[3whe]], [[4lvh]], [[6n5e]], [[6n5d]], [[6n5b]], [[6iuv]], [[6iut]], [[6e56]], [[6e4x]], [[6d0u]], [[6a4k]], [[6a67]], [[6a0z]], [[6oc3]], [[6ocb]], [[6p3r]], [[6p3s]], [[6pdx]] | + | **[[3whe]], [[4lvh]], [[6n5e]], [[6n5d]], [[6n5b]], [[6iuv]], [[6iut]], [[6e56]], [[6e4x]], [[6d0u]], [[6a4k]], [[6a67]], [[6a0z]], [[6oc3]], [[6ocb]], [[6p3r]], [[6p3s]], [[6pdx]] - IvHA + antibody<br /> |
| + | **[[7k37]], [[7k39]] - IvHA 1-566 + antibody – Cryo EM<br /> | ||
**[[6cnv]] - IvHA + envelope glycoprotein + SD84H + antibody<br /> | **[[6cnv]] - IvHA + envelope glycoprotein + SD84H + antibody<br /> | ||
**[[6vmz]] - IvHA + inhibitor<br /> | **[[6vmz]] - IvHA + inhibitor<br /> | ||
| - | *''IvHA subunit HA1'' | + | *''IvHA subunit HA1'' 1-340 |
| - | **[[4we6]], [[4we7]], [[5xl2]] – IvHA1<br /> | + | **[[4we6]], [[4we7]], [[5xl2]], [[6xpo]] – IvHA1<br /> |
| + | **[[6z2t]] – IvHA1 49-105<br /> | ||
| + | **[[7jp4]], [[7rcr]] – IvHA1 head domain 53-335<br /> | ||
**[[3qqi]], [[3mlh]] - IvHA1 receptor-binding domain <br /> | **[[3qqi]], [[3mlh]] - IvHA1 receptor-binding domain <br /> | ||
**[[2yp2]], [[2yp3]], [[2yp4]], [[2yp5]], [[2yp7]], [[2yp8]], [[2yp9]], [[3uyx]], [[4fiu]], [[5xl8]] - IvHA1 (mutant)<br /> | **[[2yp2]], [[2yp3]], [[2yp4]], [[2yp5]], [[2yp7]], [[2yp8]], [[2yp9]], [[3uyx]], [[4fiu]], [[5xl8]] - IvHA1 (mutant)<br /> | ||
**[[5xla]], [[5xl9]] - IvHA1 (mutant) + sialic acid derivative<br /> | **[[5xla]], [[5xl9]] - IvHA1 (mutant) + sialic acid derivative<br /> | ||
| - | **[[4fqj]], [[4hkx]], [[4fp8]], [[4m5z]], [[5xhv]], [[5w0d]], [[5w08]], [[5vag]] - IvHA1 + antibody<br /> | + | **[[4fqj]], [[4hkx]], [[4fp8]], [[4m5z]], [[5xhv]], [[5w0d]], [[5w08]], [[5vag]], [[6uig]], [[6ur5]], [[6urm]], [[6uyn]], [[6whk]] - IvHA1 + antibody<br /> |
**[[2vis]], [[2vit]] - IvHA1 (mutant) + antibody<br /> | **[[2vis]], [[2vit]] - IvHA1 (mutant) + antibody<br /> | ||
| + | **[[6q0e]], [[6q0h]], [[6q0i]], [[6q0l]], [[6q0o]], [[6q18]], [[6xpr]], [[6xpq]], [[6xpx]], [[6xpy]], [[6xpz]], [[6xq0]], [[6xq2]], [[6xq4]], [[7kqg]], [[7kqh]], [[7kqi]] – IvHA1 head domain + antibody<br /> | ||
| + | **[[7kc1]] – IvHA1 head domain + fusion protein + antibody – Cryo EM<br /> | ||
*''IvHA subunit HA2'' | *''IvHA subunit HA2'' | ||
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*''IvHA subunit HA1+HA2'' | *''IvHA subunit HA1+HA2'' | ||
| - | **[[3m5g]], [[3al4]], [[3lzg]], [[3m6s]], [[3ku3]], [[3ku5]], [[3hto]], [[3eyj]], [[3bt6]], [[1ru7]], [[1ruy]], [[1ruz]], [[1rd8]], [[1mql]], [[1htm]], [[2hmg]], [[3hmg]], [[4hmg]], [[5hmg]], [[1jsd]], [[1jsm]], [[3s11]], [[3s12]], [[3s13]], [[2ypg]], [[4dj6]], [[4dj7]], [[4dj8]], [[4bgw]], [[4bgz]], [[4bh2]], [[4bsa]], [[4bsg]], [[4eda]], [[4edb]], [[4h32]], [[4k62]], [[4k63]], [[4kdq]], [[4kpq]], [[4kps]], [[4fnk]], [[4fqm]], [[4k3x]], [[4kol]], [[4kth]], [[4lcx]], [[4ln3]], [[4ln6]], [[4lxv]], [[4m40]], [[4mc5]], [[4mhi]], [[4n5j]], [[4n5k]], [[4cyv]], [[4juk]], [[4jul]], [[4jum]], [[4jun]], [[4kw1]], [[4kwm]], [[4o5n]], [[4qy0]], [[4uo0]], [[4uo4]], [[4w8n]], [[4we4]], [[4we5]], [[4wst]], [[4wsw]], [[4wsx]], [[4xkd]], [[4xq5]], [[5vjk]], [[5tg8]], [[5huf]], [[5hu8]], [[5dut]], [[5bny]], [[4unz]], [[4uny]], [[4unx]], [[4unw]], [[4d00]], [[6d7u]], [[6d8b]], [[6d8d]], [[6d7c]], [[6bkp]], [[6aor]], [[6aoq]], [[5xl1]], [[6nsb]], [[6nsa]], [[6ns9]], [[6n5a]], [[6n4f]], [[5xrt]], [[5xrs]], [[6tzb]], [[6v44]], [[6v46]], [[ | + | **[[3m5g]], [[3al4]], [[3lzg]], [[3m6s]], [[3ku3]], [[3ku5]], [[3hto]], [[3eyj]], [[3bt6]], [[1ru7]], [[1ruy]], [[1ruz]], [[1rd8]], [[1mql]], [[1htm]], [[2hmg]], [[3hmg]], [[4hmg]], [[5hmg]], [[1jsd]], [[1jsm]], [[3s11]], [[3s12]], [[3s13]], [[2ypg]], [[4dj6]], [[4dj7]], [[4dj8]], [[4bgw]], [[4bgz]], [[4bh2]], [[4bsa]], [[4bsg]], [[4eda]], [[4edb]], [[4h32]], [[4k62]], [[4k63]], [[4kdq]], [[4kpq]], [[4kps]], [[4fnk]], [[4fqm]], [[4k3x]], [[4kol]], [[4kth]], [[4lcx]], [[4ln3]], [[4ln6]], [[4lxv]], [[4m40]], [[4mc5]], [[4mhi]], [[4n5j]], [[4n5k]], [[4cyv]], [[4juk]], [[4jul]], [[4jum]], [[4jun]], [[4kw1]], [[4kwm]], [[4o5n]], [[4qy0]], [[4uo0]], [[4uo4]], [[4w8n]], [[4we4]], [[4we5]], [[4wst]], [[4wsw]], [[4wsx]], [[4xkd]], [[4xq5]], [[5vjk]], [[5tg8]], [[5huf]], [[5hu8]], [[5dut]], [[5bny]], [[4unz]], [[4uny]], [[4unx]], [[4unw]], [[4d00]], [[6d7u]], [[6d8b]], [[6d8d]], [[6d7c]], [[6bkp]], [[6aor]], [[6aoq]], [[5xl1]], [[6nsb]], [[6nsa]], [[6ns9]], [[6n5a]], [[6n4f]], [[5xrt]], [[5xrs]], [[6tzb]], [[6v44]], [[6v46]], [[6v47]], [[6v48]], [[6h49]], [[6tjy]], [[6tva]], [[6tvb]], [[6tvc]], [[6tvd]], [[6tvf]], [[6zrk]], [[7a9d]] - IvHA1 + HA2<br /> |
| + | **[[7kna]] - IvHA1 + HA2 – Cryo EM<br /> | ||
**[[6hjn]], [[6hjr]], [[6y5g]], [[6y5h]], [[6y5i]], [[6y5j]], [[6y5k]], [[6y5l]] - IvHA1 + HA2 – Cryo EM<br /> | **[[6hjn]], [[6hjr]], [[6y5g]], [[6y5h]], [[6y5i]], [[6y5j]], [[6y5k]], [[6y5l]] - IvHA1 + HA2 – Cryo EM<br /> | ||
| - | **[[4cqp]], [[4cqq]], [[4cqr]], [[4cqs]], [[4cqu]], [[4cqv]], [[4cr0]], [[4uo3]], [[4n5z]], [[4nrj]], [[4nrk]], [[4nrl]], [[3ku6]], [[4f3z]], [[4jtx]], [[4ju0]], [[4jug]], [[4juh]], [[4juj]], [[4k65]], [[4kdm]], [[3zpa]], [[4gxx]], [[4n5y]], [[5thb]], [[5th0]], [[5tgo]], [[4zcj]], [[6bko]], [[6bkn]], [[6bkm]], [[6aop]], [[5xlb]], [[5xl5]], [[5vtz]], [[5vtx]], [[5vtu]], [[6nsg]], [[6nsf]], [[6nsc]], [[6e7h]], [[6e7g]], [[6icw]], [[6icx]], [[6icy]], [[6id2]], [[6id3]], [[6id5]], [[6id8]], [[6id9]], [[6ida]], [[6idb]], [[6idz]] - IvHA1 (mutant) + HA2<br /> | + | **[[4cqp]], [[4cqq]], [[4cqr]], [[4cqs]], [[4cqu]], [[4cqv]], [[4cr0]], [[4uo3]], [[4n5z]], [[4nrj]], [[4nrk]], [[4nrl]], [[3ku6]], [[4f3z]], [[4jtx]], [[4ju0]], [[4jug]], [[4juh]], [[4juj]], [[4k65]], [[4kdm]], [[3zpa]], [[4gxx]], [[4n5y]], [[5thb]], [[5th0]], [[5tgo]], [[4zcj]], [[6bko]], [[6bkn]], [[6bkm]], [[6aop]], [[5xlb]], [[5xl5]], [[5vtz]], [[5vtx]], [[5vtu]], [[6nsg]], [[6nsf]], [[6nsc]], [[6e7h]], [[6e7g]], [[6icw]], [[6icx]], [[6icy]], [[6id2]], [[6id3]], [[6id5]], [[6id8]], [[6id9]], [[6ida]], [[6idb]], [[6idz]], [[6tjw]], [[6tvr]], [[6tvt]], [[6twh]], [[6twi]], [[6tws]], [[6twv]], [[6txo]], [[6ty1]] - IvHA1 (mutant) + HA2<br /> |
**[[2viu]], [[3vun]], [[5thf]] - IvHA1 (mutant) + HA2 (mutant) <br /> | **[[2viu]], [[3vun]], [[5thf]] - IvHA1 (mutant) + HA2 (mutant) <br /> | ||
**[[4i78]], [[4m4y]], [[3qqb]], [[3qqe]], [[3qqo]], [[6nhp]], [[6nhq]], [[6nhr]] - IvHA1 + HA2 (mutant)<br /> | **[[4i78]], [[4m4y]], [[3qqb]], [[3qqe]], [[3qqo]], [[6nhp]], [[6nhq]], [[6nhr]] - IvHA1 + HA2 (mutant)<br /> | ||
| - | **[[1jsh]], [[1jsi]], [[1jsn]], [[1jso]], [[4bgx]], [[4bgy]], [[4bh0]], [[4bh1]], [[4bh3]], [[4bh4]], [[4bsb]], [[4bsc]], [[4bsd]], [[4bsh]], [[4bsi]], [[4jtv]], [[4k64]], [[3znk]], [[3znl]], [[3znm]], [[3zp0]], [[3zp1]], [[4ln4]], [[4ln8]], [[4m44]], [[4bse]], [[4bsf]], [[4cyw]], [[4cyz]], [[4cz0]], [[4n62]], [[4qy1]], [[4qy2]], [[4uo1]], [[4uo2]], [[4uo5]], [[4uo6]], [[4uo7]], [[4uo8]], [[4uoa]], [[4wa2]], [[4wsu]], [[4wsv]], [[4xke]], [[4xkf]], [[4xkg]], [[4xqo]], [[4xqu]], [[5ajm]], [[5tg9]], [[5br6]], [[5br3]], [[5br0]], [[5bqz]], [[5bqy]], [[4yyb]], [[4yya]], [[4yy9]], [[4yy7]], [[4yy1]], [[4yy0]], [[6bkt]], [[6aov]], [[6aou]], [[6aot]], [[6aos]], [[5xl4]], [[5xl3]] - IvHA1 + HA2 + sialic acid derivative<br /> | + | **[[1jsh]], [[1jsi]], [[1jsn]], [[1jso]], [[4bgx]], [[4bgy]], [[4bh0]], [[4bh1]], [[4bh3]], [[4bh4]], [[4bsb]], [[4bsc]], [[4bsd]], [[4bsh]], [[4bsi]], [[4jtv]], [[4k64]], [[3znk]], [[3znl]], [[3znm]], [[3zp0]], [[3zp1]], [[4ln4]], [[4ln8]], [[4m44]], [[4bse]], [[4bsf]], [[4cyw]], [[4cyz]], [[4cz0]], [[4n62]], [[4qy1]], [[4qy2]], [[4uo1]], [[4uo2]], [[4uo5]], [[4uo6]], [[4uo7]], [[4uo8]], [[4uoa]], [[4wa2]], [[4wsu]], [[4wsv]], [[4xke]], [[4xkf]], [[4xkg]], [[4xqo]], [[4xqu]], [[5ajm]], [[5tg9]], [[5br6]], [[5br3]], [[5br0]], [[5bqz]], [[5bqy]], [[4yyb]], [[4yya]], [[4yy9]], [[4yy7]], [[4yy1]], [[4yy0]], [[6bkt]], [[6aov]], [[6aou]], [[6aot]], [[6aos]], [[5xl4]], [[5xl3]], [[6wcr]] - IvHA1 + HA2 + sialic acid derivative<br /> |
**[[6cf5]], [[6ce6]] - IvHA1 + HA2 + taurine derivative<br /> | **[[6cf5]], [[6ce6]] - IvHA1 + HA2 + taurine derivative<br /> | ||
**[[3ubj]], [[3ube]], [[3ubn]], [[3ubq]], [[4k66]], [[4k67]], [[4kdn]], [[4kdo]], [[3zp3]], [[3zp2]], [[3zp6]], [[3zpb]], [[4cqw]], [[4cqx]], [[4cqy]], [[4cqz]], [[4uo9]], [[5vjm]], [[5vjl]], [[5thc]], [[5th1]], [[5tgv]], [[5tgu]], [[5e35]], [[5e34]], [[5e32]], [[5e30]], [[5e2z]], [[5e2y]], [[6bks]], [[6bkr]], [[6bkq]], [[5xld]], [[5xlc]], [[5xl7]], [[5xl6]], [[5vu4]], [[5vty]], [[5vtw]], [[5vtr]], [[5vtq]], [[5vmj]], [[5vmg]], [[5vmf]], [[5vmc]], [[5t0e]], [[5t0d]], [[5t0b]], [[5t08]] - IvHA1 (mutant) + HA2 + sialic acid derivative<br /> | **[[3ubj]], [[3ube]], [[3ubn]], [[3ubq]], [[4k66]], [[4k67]], [[4kdn]], [[4kdo]], [[3zp3]], [[3zp2]], [[3zp6]], [[3zpb]], [[4cqw]], [[4cqx]], [[4cqy]], [[4cqz]], [[4uo9]], [[5vjm]], [[5vjl]], [[5thc]], [[5th1]], [[5tgv]], [[5tgu]], [[5e35]], [[5e34]], [[5e32]], [[5e30]], [[5e2z]], [[5e2y]], [[6bks]], [[6bkr]], [[6bkq]], [[5xld]], [[5xlc]], [[5xl7]], [[5xl6]], [[5vu4]], [[5vty]], [[5vtw]], [[5vtr]], [[5vtq]], [[5vmj]], [[5vmg]], [[5vmf]], [[5vmc]], [[5t0e]], [[5t0d]], [[5t0b]], [[5t08]] - IvHA1 (mutant) + HA2 + sialic acid derivative<br /> | ||
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**[[3r2x]] – IvHA1 receptor-binding domain + HA2 fusion subunit + designed HA-binding protein <br /> | **[[3r2x]] – IvHA1 receptor-binding domain + HA2 fusion subunit + designed HA-binding protein <br /> | ||
**[[2fk0]] - IvHA14 receptor-binding domain + HA2 membrane-fusion domain<br /> | **[[2fk0]] - IvHA14 receptor-binding domain + HA2 membrane-fusion domain<br /> | ||
| - | **[[3lzf]], [[3gbm]], [[3gbn]], [[3fku]], [[1ken]], [[1eo8]], [[1qfu]], [[2vir]], [[3sdy]], [[3ztj]], [[3ztn]], [[4gms]], [[4f15]], [[4hf5]], [[4hfu]], [[4hg4]], [[4hlz]], [[4kvn]], [[4fqi]], [[4fqk]], [[4gxu]], [[4fqr]], [[4fqv]], [[4fqy]], [[4mhh]], [[4mhj]], [[4nm8]], [[4o58]], [[4o5i]], [[4py8]], [[5v2a]], [[5umn]], [[5ugy]], [[5kaq]], [[5kan]], [[5k9q]], [[5k9o]], [[5k9k]], [[5jw4]], [[5jw3]], [[5ibl]], [[5gjt]], [[5gjs]], [[5dur]], [[5dup]], [[5dum]], [[5a3i]], [[4yk4]], [[4yjz]], [[4xrc]], [[4xnq]], [[4xnm]], [[4ubd]], [[4r8w]], [[6b3m]], [[5wko]], [[5w6g]], [[5ug0]], [[6nz7]], [[6ml8]], [[6ii9]], [[6ii8]], [[6ii4]], [[6fyw]], [[6fyu]], [[6fyt]], [[6e3h]], [[5y2m]], [[5y2l]], [[5xku]], [[5w42]], [[6wiz]], [[6wj1]] - IvHA1 + HA2 + antibody<br /> | + | **[[3lzf]], [[3gbm]], [[3gbn]], [[3fku]], [[1ken]], [[1eo8]], [[1qfu]], [[2vir]], [[3sdy]], [[3ztj]], [[3ztn]], [[4gms]], [[4f15]], [[4hf5]], [[4hfu]], [[4hg4]], [[4hlz]], [[4kvn]], [[4fqi]], [[4fqk]], [[4gxu]], [[4fqr]], [[4fqv]], [[4fqy]], [[4mhh]], [[4mhj]], [[4nm8]], [[4o58]], [[4o5i]], [[4py8]], [[5v2a]], [[5umn]], [[5ugy]], [[5kaq]], [[5kan]], [[5k9q]], [[5k9o]], [[5k9k]], [[5jw4]], [[5jw3]], [[5ibl]], [[5gjt]], [[5gjs]], [[5dur]], [[5dup]], [[5dum]], [[5a3i]], [[4yk4]], [[4yjz]], [[4xrc]], [[4xnq]], [[4xnm]], [[4ubd]], [[4r8w]], [[6b3m]], [[5wko]], [[5w6g]], [[5ug0]], [[6nz7]], [[6ml8]], [[6ii9]], [[6ii8]], [[6ii4]], [[6fyw]], [[6fyu]], [[6fyt]], [[6e3h]], [[5y2m]], [[5y2l]], [[5xku]], [[5w42]], [[6wex]], [[6wez]], [[6wf0]], [[6wiz]], [[6wj1]], [[7j1x]] - IvHA1 + HA2 + antibody<br /> |
**[[5t6s]], [[5t6n]] - IvHA1 + HA2 + drug<br /> | **[[5t6s]], [[5t6n]] - IvHA1 + HA2 + drug<br /> | ||
| - | **[[5uk2]], [[5uk1]], [[5uk0]], [[5ujz]], [[6mlm]], [[6hjp]], [[6hjq]] - IvHA1 + HA2 + antibody – Cryo EM<br /> | + | **[[5uk2]], [[5uk1]], [[5uk0]], [[5ujz]], [[6mlm]], [[6hjp]], [[6hjq]], [[6wxl]], [[6wzt]], [[6xgc]], [[6xsk]], [[7k3a]], [[7k3b]] - IvHA1 + HA2 + antibody – Cryo EM<br /> |
**[[5w6u]], [[5w6t]], [[5w6r]], [[5w6i]], [[5w5u]], [[5w5s]], [[5vli]] - IvHA1 + HA2 + peptide<br /> | **[[5w6u]], [[5w6t]], [[5w6r]], [[5w6i]], [[5w5u]], [[5w5s]], [[5vli]] - IvHA1 + HA2 + peptide<br /> | ||
**[[5kuy]] - IvHA1 + HA2 (mutant) + polypeptide inhibitor<br /> | **[[5kuy]] - IvHA1 + HA2 (mutant) + polypeptide inhibitor<br /> | ||
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**[[6jjn]], [[6jjm]] – HN – mumps rubulavirus<br /> | **[[6jjn]], [[6jjm]] – HN – mumps rubulavirus<br /> | ||
**[[6sg8]] - HN – sosuga rubulavirus<br /> | **[[6sg8]] - HN – sosuga rubulavirus<br /> | ||
| + | **[[7bwu]] - HN – avian orthoavulavirus<br /> | ||
*Measles virus hemagglutinin | *Measles virus hemagglutinin | ||
Revision as of 08:30, 29 August 2021
3D structures of hemagglutinin
Updated on 29-August-2021
