This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3dwl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:53, 30 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3dwl' size='340' side='right'caption='[[3dwl]], [[Resolution|resolution]] 3.78&Aring;' scene=''>
<StructureSection load='3dwl' size='340' side='right'caption='[[3dwl]], [[Resolution|resolution]] 3.78&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3dwl]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Schizosaccharomyces_pombe Schizosaccharomyces pombe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DWL OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3DWL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3dwl]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Schizosaccharomyces_pombe Schizosaccharomyces pombe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DWL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DWL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.78&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3dwl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dwl OCA], [http://pdbe.org/3dwl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dwl RCSB], [http://www.ebi.ac.uk/pdbsum/3dwl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dwl ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dwl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dwl OCA], [https://pdbe.org/3dwl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dwl RCSB], [https://www.ebi.ac.uk/pdbsum/3dwl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dwl ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ARPC5_SCHPO ARPC5_SCHPO]] Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. [[http://www.uniprot.org/uniprot/ARPC3_SCHPO ARPC3_SCHPO]] Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. [[http://www.uniprot.org/uniprot/ARP3_SCHPO ARP3_SCHPO]] Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament (By similarity). May be involved in cytokinesis. [[http://www.uniprot.org/uniprot/ARPC2_SCHPO ARPC2_SCHPO]] Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament (By similarity). [[http://www.uniprot.org/uniprot/ARPC1_SCHPO ARPC1_SCHPO]] Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. [[http://www.uniprot.org/uniprot/ARPC4_SCHPO ARPC4_SCHPO]] Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament (By similarity).
+
[https://www.uniprot.org/uniprot/ARP3_SCHPO ARP3_SCHPO] Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament (By similarity). May be involved in cytokinesis.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 28: Line 29:
</div>
</div>
<div class="pdbe-citations 3dwl" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3dwl" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Actin-related protein 3D structures|Actin-related protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 34: Line 38:
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Schizosaccharomyces pombe]]
[[Category: Schizosaccharomyces pombe]]
-
[[Category: Nolen, B J]]
+
[[Category: Nolen BJ]]
-
[[Category: Pollard, T D]]
+
[[Category: Pollard TD]]
-
[[Category: Actin-binding]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Cytoskeleton]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Propellor]]
+
-
[[Category: Structural protein]]
+
-
[[Category: Wd repeat]]
+

Current revision

Crystal Structure of Fission Yeast Arp2/3 Complex Lacking the Arp2 Subunit

PDB ID 3dwl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools