This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5mwk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:52, 8 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5mwk' size='340' side='right'caption='[[5mwk]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5mwk' size='340' side='right'caption='[[5mwk]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5mwk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_thetaiotaomicron"_distaso_1912 "bacillus thetaiotaomicron" distaso 1912]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MWK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5MWK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5mwk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MWK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MWK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ARA:ALPHA-L-ARABINOSE'>ARA</scene>, <scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=RAM:ALPHA-L-RHAMNOSE'>RAM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=8OQ:ALPHA-D-ACERIC+ACID'>8OQ</scene>, <scene name='pdbligand=8PK:2-O-METHYL,+4-O-ACETYL-ALPHA-L-FUCOSEPYRANOSE'>8PK</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8OQ:ALPHA-D-ACERIC+ACID'>8OQ</scene>, <scene name='pdbligand=8PK:2-O-METHYL,+4-O-ACETYL-ALPHA-L-FUCOSEPYRANOSE'>8PK</scene>, <scene name='pdbligand=ARA:ALPHA-L-ARABINOSE'>ARA</scene>, <scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=RAM:ALPHA-L-RHAMNOSE'>RAM</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BT_0986 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 "Bacillus thetaiotaomicron" Distaso 1912])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mwk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mwk OCA], [https://pdbe.org/5mwk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mwk RCSB], [https://www.ebi.ac.uk/pdbsum/5mwk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mwk ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5mwk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mwk OCA], [http://pdbe.org/5mwk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mwk RCSB], [http://www.ebi.ac.uk/pdbsum/5mwk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mwk ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8A931_BACTN Q8A931_BACTN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus thetaiotaomicron distaso 1912]]
+
[[Category: Bacteroides thetaiotaomicron]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Basle, A]]
+
[[Category: Basle A]]
-
[[Category: Cartmell, A]]
+
[[Category: Cartmell A]]
-
[[Category: Gilbert, H J]]
+
[[Category: Gilbert HJ]]
-
[[Category: Labourel, A]]
+
[[Category: Labourel A]]
-
[[Category: Luis, A S]]
+
[[Category: Luis AS]]
-
[[Category: Ndeh, D]]
+
[[Category: Ndeh D]]
-
[[Category: Rogowski, A]]
+
[[Category: Rogowski A]]
-
[[Category: Venditto, I]]
+
[[Category: Venditto I]]
-
[[Category: Cazy family 106]]
+
-
[[Category: Glycoside hydrolase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Plant pectin]]
+
-
[[Category: Rhamnosidase]]
+

Current revision

Glycoside hydrolase BT_0986

PDB ID 5mwk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools