7cfm

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Current revision (09:22, 9 October 2024) (edit) (undo)
 
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==Cryo-EM structure of the P395-bound GPBAR-Gs complex==
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<StructureSection load='7cfm' size='340' side='right'caption='[[7cfm]]' scene=''>
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<StructureSection load='7cfm' size='340' side='right'caption='[[7cfm]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7cfm]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CFM FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7cfm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cfm OCA], [http://pdbe.org/7cfm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7cfm RCSB], [http://www.ebi.ac.uk/pdbsum/7cfm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7cfm ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CLR:CHOLESTEROL'>CLR</scene>, <scene name='pdbligand=FWX:2-(ethylamino)-6-[3-(4-propan-2-ylphenyl)propanoyl]-7,8-dihydro-5~{H}-pyrido[4,3-d]pyrimidine-4-carboxamide'>FWX</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cfm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cfm OCA], [https://pdbe.org/7cfm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cfm RCSB], [https://www.ebi.ac.uk/pdbsum/7cfm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cfm ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The G protein-coupled bile acid receptor (GPBAR) conveys the cross-membrane signaling of a vast variety of bile acids and is a signaling hub in the liver-bile-acid-microbiota-metabolism axis(1-3). Here, we report the cryo-EM structures of GPBAR-Gs complexes stabilized by either the high-affinity P395(4) or the semisynthesized bile acid derivative INT-777(1,3) at 3-A resolution. These structures revealed a large oval-shaped pocket containing several polar groups positioned to accommodate the amphipathic cholic core of bile acids, a fingerprint of key residues to recognize diverse bile acids in the orthosteric site, a putative second bile acid binding site with allosteric properties and structural features contributing to bias properties. Moreover, GPBAR undertakes an atypical mode of activation and G-protein coupling featuring a different set of key residues connecting the ligand binding pocket to the Gs coupling site, and a specific interaction motif localized in intracellular loop 3. Overall, our study not only reveals unique structural features of GPBAR involved in bile acid recognition and allosteric effects, but also suggests the presence of distinct connecting mechanisms between the ligand binding pocket and the G protein binding site in the GPCR superfamily.
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Structural basis of GPBAR activation and bile acid recognition.,Yang F, Mao C, Guo L, Lin J, Ming Q, Xiao P, Wu X, Shen Q, Guo S, Shen DD, Lu R, Zhang L, Huang S, Ping Y, Zhang C, Ma C, Zhang K, Liang X, Shen Y, Nan F, Yi F, Luca VC, Zhou J, Jiang C, Sun JP, Xie X, Yu X, Zhang Y Nature. 2020 Jul 22. pii: 10.1038/s41586-020-2569-1. doi:, 10.1038/s41586-020-2569-1. PMID:32698187<ref>PMID:32698187</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7cfm" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Transducin 3D structures|Transducin 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Z-disk]]
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[[Category: Synthetic construct]]
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[[Category: Guo L]]
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[[Category: Guo S]]
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[[Category: Huang S]]
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[[Category: Jiang C]]
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[[Category: Liang X]]
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[[Category: Lin J]]
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[[Category: Lu R]]
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[[Category: Luca V]]
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[[Category: Ma C]]
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[[Category: Mao C]]
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[[Category: Ming Q]]
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[[Category: Nan F]]
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[[Category: Ping Y]]
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[[Category: Shen D]]
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[[Category: Shen Q]]
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[[Category: Shen Y]]
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[[Category: Sun J]]
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[[Category: Wu X]]
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[[Category: Xiao P]]
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[[Category: Xie X]]
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[[Category: Yang F]]
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[[Category: Yi F]]
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[[Category: Yu X]]
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[[Category: Zhang C]]
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[[Category: Zhang K]]
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[[Category: Zhang L]]
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[[Category: Zhang Y]]
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[[Category: Zhou J]]

Current revision

Cryo-EM structure of the P395-bound GPBAR-Gs complex

PDB ID 7cfm

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