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3epx

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Current revision (06:31, 6 September 2023) (edit) (undo)
 
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<StructureSection load='3epx' size='340' side='right'caption='[[3epx]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='3epx' size='340' side='right'caption='[[3epx]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3epx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Duttonella_vivax Duttonella vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EPX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3EPX FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3epx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_vivax Trypanosoma vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EPX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EPX FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMQ:(2R,3R,4S)-2-(HYDROXYMETHYL)-1-(QUINOLIN-8-YLMETHYL)PYRROLIDINE-3,4-DIOL'>IMQ</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ff2|2ff2]], [[1hoz|1hoz]], [[1hp0|1hp0]], [[1kic|1kic]], [[3b9g|3b9g]], [[3epw|3epw]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMQ:(2R,3R,4S)-2-(HYDROXYMETHYL)-1-(QUINOLIN-8-YLMETHYL)PYRROLIDINE-3,4-DIOL'>IMQ</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Purine_nucleosidase Purine nucleosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.1 3.2.2.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3epx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3epx OCA], [https://pdbe.org/3epx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3epx RCSB], [https://www.ebi.ac.uk/pdbsum/3epx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3epx ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3epx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3epx OCA], [http://pdbe.org/3epx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3epx RCSB], [http://www.ebi.ac.uk/pdbsum/3epx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3epx ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9GPQ4_TRYVI Q9GPQ4_TRYVI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Duttonella vivax]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Purine nucleosidase]]
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[[Category: Trypanosoma vivax]]
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[[Category: Augustyns, K]]
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[[Category: Augustyns K]]
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[[Category: Berg, M]]
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[[Category: Berg M]]
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[[Category: Goeminne, A]]
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[[Category: Goeminne A]]
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[[Category: Haemers, A]]
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[[Category: Haemers A]]
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[[Category: Steyaert, J]]
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[[Category: Steyaert J]]
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[[Category: Vandemeulebroucke, A]]
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[[Category: Vandemeulebroucke A]]
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[[Category: Versees, W]]
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[[Category: Versees W]]
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[[Category: Active site loop]]
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[[Category: Aromatic stacking]]
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[[Category: Hydrolase]]
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[[Category: Rossmann fold]]
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Current revision

Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-2-(hydroxymethyl)-1-(quinolin-8-ylmethyl)pyrrolidin-3,4-diol

PDB ID 3epx

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